RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 CDY1Q9Y6F8 540 aa6.24□□□□□ -1.41
CPSF2-205ENST00000556622 TEX264Q9Y6I9 313 aa6.24□□□□□ -1.41
CPSF2-205ENST00000556622 SLC4A7Q9Y6M7 1214 aa6.24□□□□□ -1.41
CPSF2-205ENST00000556622 MYO9BQ13459 2157 aa6.24□□□□□ -1.41
CPSF2-205ENST00000556622 SIP14410 1827 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 A0A0G2JND7 137 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 TCRBV9S1A1TA0A576 114 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 C2CD4BA6NLJ0 364 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 HRKO00198 91 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 AURKAO14965 403 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 KCNN4O15554 427 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 FAM189A1O60320 539 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DIAPH2O60879 1101 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 FBXO21O94952 628 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 ITGB3P05106 788 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 SERPINA6P08185 405 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 PFKMP08237 780 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 SRGAP2BP0DMP2 458 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 NAT2P11245 290 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 PNLIPP16233 465 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 PRDX6P30041 224 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DNAJA1P31689 397 aaKnown RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 FOXN2P32314 431 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 HTR7P34969 479 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 ELK3P41970 407 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 RAP1GDS1P52306 607 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 BCAT1P54687 386 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DYNLT1P63172 113 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 KCNJ2P63252 427 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 COG7P83436 770 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 TMPRSS15P98073 1019 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 ZNF33AQ06730 810 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 STX3Q13277 289 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 PRPSAP1Q14558 356 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 KCNJ11Q14654 390 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 PRKD1Q15139 912 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DPYSL2Q16555 572 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 FXNQ16595 210 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 UGP2Q16851 508 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 ARL13BQ3SXY8 428 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 PTPN20Q4JDL3 420 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 CFAP157Q5JU67 520 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 GRTP1Q5TC63 336 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 LMBRD2Q68DH5 695 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 ARHGAP17Q68EM7 881 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 SLC9A4Q6AI14 798 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 ITPRIPL1Q6GPH6 555 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 CAPRIN2Q6IMN6 1127 aaKnown RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DENND1BQ6P3S1 775 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 GALNT18Q6P9A2 607 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 TLDC1Q6P9B6 456 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 CYP2R1Q6VVX0 501 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 LRRC8DQ7L1W4 858 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 OTOAQ7RTW8 1153 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 LINC00523Q86TU6 105 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 MTDHQ86UE4 582 aaKnown RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 SERINC5Q86VE9 423 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 TMEM126BQ8IUX1 230 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 C4orf33Q8N1A6 199 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 AFAP1L2Q8N4X5 818 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 WDTC1Q8N5D0 677 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DEFB123Q8N688 67 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 CATSPER1Q8NEC5 780 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 RDH11Q8TC12 318 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DEPDC1BQ8WUY9 529 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 TFB1MQ8WVM0 346 aaKnown RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DNAJB3Q8WWF6 145 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 HERVK_113Q902F9 699 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 HSPH1Q92598 858 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 STAMBPL1Q96FJ0 436 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 OXNAD1Q96HP4 312 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 ZBTB45Q96K62 511 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 MRGPRX3Q96LB0 322 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 NLRP4Q96MN2 994 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 RILPQ96NA2 401 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 PCYT2Q99447 389 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 SERPINI1Q99574 410 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 EBNA1BP2Q99848 306 aaKnown RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 ZNF552Q9H707 407 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 ETNK2Q9NVF9 386 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DNAJC17Q9NVM6 304 aaKnown RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 PDP2Q9P2J9 529 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 STX18Q9P2W9 335 aaKnown RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 CGGBP1Q9UFW8 167 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 TAGLN3Q9UI15 199 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 MSRAQ9UJ68 235 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 HAO1Q9UJM8 370 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 TRHDEQ9UKU6 1024 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 UBQLN1Q9UMX0 589 aaKnown RBP6.23□□□□□ -1.41
CPSF2-205ENST00000556622 CHKBQ9Y259 395 aa6.23□□□□□ -1.41
CPSF2-205ENST00000556622 DYTNA2CJ06 578 aa6.22□□□□□ -1.41
CPSF2-205ENST00000556622 MAGEA13PA6NCF6 341 aa6.22□□□□□ -1.41
CPSF2-205ENST00000556622 GRXCR1A8MXD5 290 aa6.22□□□□□ -1.41
CPSF2-205ENST00000556622 NVLO15381 856 aaKnown RBP6.22□□□□□ -1.41
CPSF2-205ENST00000556622 TIMM44O43615 452 aa6.22□□□□□ -1.41
CPSF2-205ENST00000556622 MPOP05164 745 aa6.22□□□□□ -1.41
CPSF2-205ENST00000556622 APRTP07741 180 aa6.22□□□□□ -1.41
CPSF2-205ENST00000556622 RPSAP08865 295 aaKnown RBP6.22□□□□□ -1.41
CPSF2-205ENST00000556622 GSTM1P09488 218 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 228.5 ms