RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 ZNF669Q96BR6 464 aaPredicted RBP17.28■□□□□ 0.36
LRP1-210ENST00000556247 GUCD1Q96NT3 240 aa17.28■□□□□ 0.36
LRP1-210ENST00000556247 RANBP9Q96S59 729 aa17.28■□□□□ 0.36
LRP1-210ENST00000556247 TRIM56Q9BRZ2 755 aaKnown RBP17.28■□□□□ 0.36
LRP1-210ENST00000556247 KIFC1Q9BW19 673 aa17.28■□□□□ 0.36
LRP1-210ENST00000556247 PPCSQ9HAB8 311 aa17.28■□□□□ 0.36
LRP1-210ENST00000556247 TMBIM4Q9HC24 238 aa17.28■□□□□ 0.36
LRP1-210ENST00000556247 MRM3Q9HC36 420 aaKnown RBP17.28■□□□□ 0.36
LRP1-210ENST00000556247 BCCIPQ9P287 314 aaKnown RBP eCLIP17.28■□□□□ 0.36
LRP1-210ENST00000556247 LIMD1Q9UGP4 676 aa17.28■□□□□ 0.36
LRP1-210ENST00000556247 TCAF1Q9Y4C2 921 aa17.28■□□□□ 0.36
LRP1-210ENST00000556247 TTC34A8MYJ7 566 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 PRRT4C9JH25 899 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 GOLGA8KD6RF30 607 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 ARNTLO00327 626 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 SOCS5O75159 536 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 USP1O94782 785 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 SYF2O95926 243 aaKnown RBP17.27■□□□□ 0.36
LRP1-210ENST00000556247 PRLP01236 227 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 SERPINA4P29622 427 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 GRIA2P42262 883 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 SLCO1A2P46721 670 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 EPHB1P54762 984 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 GRM3Q14832 879 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 FNDC3BQ53EP0 1204 aaKnown RBP17.27■□□□□ 0.36
LRP1-210ENST00000556247 Q6ZVU0 165 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 CYS1Q717R9 158 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 TMEM135Q86UB9 458 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 CAMK1DQ8IU85 385 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 PHTF2Q8N3S3 785 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.27■□□□□ 0.36
LRP1-210ENST00000556247 TUBGCP5Q96RT8 1024 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 PLAC1Q9HBJ0 212 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 FAM53CQ9NYF3 392 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 SLC24A2Q9UI40 661 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 PCDHB9Q9Y5E1 797 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 FAM169AQ9Y6X4 670 aa17.27■□□□□ 0.36
LRP1-210ENST00000556247 RGS16O15492 202 aaPredicted RBP17.26■□□□□ 0.35
LRP1-210ENST00000556247 KAT7O95251 611 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 PIGNO95427 931 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 PDHA1P08559 390 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 PRKCHP24723 683 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 MSH2P43246 934 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 CCNHP51946 323 aaPredicted RBP17.26■□□□□ 0.35
LRP1-210ENST00000556247 RPL26P61254 145 aaKnown RBP17.26■□□□□ 0.35
LRP1-210ENST00000556247 MESP2Q0VG99 397 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 FRG1Q14331 258 aaKnown RBP17.26■□□□□ 0.35
LRP1-210ENST00000556247 PTPRNQ16849 979 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 SKIDA1Q1XH10 827 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 DPY19L3Q6ZPD9 716 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 NLRP9Q7RTR0 991 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 CTAGE3PQ8IX95 158 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 KDM1BQ8NB78 822 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 BLOC1S5Q8TDH9 187 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 FRS2Q8WU20 508 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 ARL8AQ96BM9 186 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 MRRFQ96E11 262 aaKnown RBP17.26■□□□□ 0.35
LRP1-210ENST00000556247 MYO19Q96H55 970 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 FCRL3Q96P31 734 aaPredicted RBP17.26■□□□□ 0.35
LRP1-210ENST00000556247 CPEB1Q9BZB8 566 aaKnown RBP17.26■□□□□ 0.35
LRP1-210ENST00000556247 ZDHHC6Q9H6R6 413 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 PPANQ9NQ55 473 aaKnown RBP17.26■□□□□ 0.35
LRP1-210ENST00000556247 MOCS1Q9NZB8 636 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 PRKAG3Q9UGI9 489 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 FETUBQ9UGM5 382 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 RPL26L1Q9UNX3 145 aaKnown RBP17.26■□□□□ 0.35
LRP1-210ENST00000556247 IKBKGQ9Y6K9 419 aa17.26■□□□□ 0.35
LRP1-210ENST00000556247 CCDC78A2IDD5 438 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 ANKRD66B4E2M5 251 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 WASH3PC4AMC7 463 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 HTRA2O43464 458 aaPredicted RBP17.25■□□□□ 0.35
LRP1-210ENST00000556247 FZD6O60353 706 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 CDH16O75309 829 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 ALDH1A2O94788 518 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 PGLSO95336 258 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 PAMP19021 973 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 NMBRP28336 390 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 GKP32189 559 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 SOX9P48436 509 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 MGAT5Q09328 741 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 MSLNQ13421 630 aaPredicted RBP17.25■□□□□ 0.35
LRP1-210ENST00000556247 E2F5Q15329 346 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 SMAD2Q15796 467 aaKnown RBP17.25■□□□□ 0.35
LRP1-210ENST00000556247 QPCTQ16769 361 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 KBTBD12Q3ZCT8 623 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 LEXMQ3ZCV2 418 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 TSTD2Q5T7W7 516 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 AGBL2Q5U5Z8 902 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 NAIF1Q69YI7 327 aaPredicted RBP17.25■□□□□ 0.35
LRP1-210ENST00000556247 RIBC1Q8N443 379 aaPredicted RBP17.25■□□□□ 0.35
LRP1-210ENST00000556247 SLC44A3Q8N4M1 653 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 PPM1NQ8N819 430 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 OR2A12Q8NGT7 310 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 BRSK1Q8TDC3 778 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 CDKL2Q92772 493 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 CHFRQ96EP1 664 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 MFSD3Q96ES6 412 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 ZNF641Q96N77 438 aaPredicted RBP17.25■□□□□ 0.35
LRP1-210ENST00000556247 HEPHQ9BQS7 1158 aa17.25■□□□□ 0.35
LRP1-210ENST00000556247 STMN4Q9H169 189 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms