RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 SUCOQ9UBS9 1254 aaKnown RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 TDRKHQ9Y2W6 561 aaKnown RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 KCNK1O00180 336 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 ABLIM1O14639 778 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 CA12O43570 354 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 FGBP02675 491 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 SERPINA6P08185 405 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 RHOQP17081 205 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 ADSSP30520 456 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 FMO4P31512 558 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 HSD17B2P37059 387 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 PTPN9P43378 593 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 SCNN1GP51170 649 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 AP1S1P61966 158 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 BROXQ5VW32 411 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 LIN54Q6MZP7 749 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 GPR142Q7Z601 462 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 CREG2Q8IUH2 290 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 MTMR14Q8NCE2 650 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 FBXO22Q8NEZ5 403 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 GDPD5Q8WTR4 605 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 TBCDQ9BTW9 1192 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 NDOR1Q9UHB4 597 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 AGO1Q9UL18 857 aaKnown RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 LZTS1Q9Y250 596 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 ASB3Q9Y575 518 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 ATP6V1G2O95670 118 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 SCNN1AP37088 669 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 UGT2B15P54855 530 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 CAPN13Q6MZZ7 669 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 TAPT1Q6NXT6 567 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 LRRC55Q6ZSA7 311 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 EEF1AKMT1Q8WVE0 214 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 CRELD1Q96HD1 420 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 AIF1LQ9BQI0 150 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 HHATLQ9HCP6 504 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 NECTIN3Q9NQS3 549 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 FBXO5Q9UKT4 447 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 SAMD4AQ9UPU9 718 aaKnown RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 ERGIC3Q9Y282 383 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 TSC22D4Q9Y3Q8 395 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 V9GYQ6 96 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 hCG_1818297A0A087WSY0 165 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 UBE2QL1A1L167 161 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 CDH5P33151 784 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 PPIGQ13427 754 aaKnown RBP eCLIP10.78□□□□□ -0.681e-12■□□□□ 8.7
ACTN1-216ENST00000556083 SLC24A5Q71RS6 500 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 SLC30A8Q8IWU4 369 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 CACTIN-AS1Q8N1I8 211 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 WFIKKN2Q8TEU8 576 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 BHMTQ93088 406 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 RAB11FIP5Q9BXF6 653 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 NIFKQ9BYG3 293 aaKnown RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ZDHHC6Q9H6R6 413 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ANKZF1Q9H8Y5 726 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 HPS4Q9NQG7 708 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ARHGEF3Q9NR81 526 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 KLQ9UEF7 1012 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 DDX20Q9UHI6 824 aaKnown RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ZNF780BQ9Y6R6 833 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 SLIT3O75094 1523 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 SLC25A12O75746 678 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 NUDT14O95848 222 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 DNTTP04053 509 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 FEN1P39748 380 aaKnown RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ORC1Q13415 861 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 LRRC74BQ6ZQY2 392 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 CXXC5Q7LFL8 322 aaKnown RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 DSELQ8IZU8 1212 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ZNF514Q96K75 400 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 OSBPL11Q9BXB4 747 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 FAM105AQ9NUU6 356 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 GEMIN8Q9NWZ8 242 aaKnown RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 E2F8A0AVK6 867 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 EML1O00423 815 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 MEIS2O14770 477 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ASNA1O43681 348 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 WBP4O75554 376 aaKnown RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 ASLP04424 464 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 APODP05090 189 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 UMPSP11172 480 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 COL6A1P12109 1028 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 SSTR1P30872 391 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 PLK1P53350 603 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 CAPSQ13938 189 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 KLHL12Q53G59 568 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 FAM35AQ86V20 835 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 TBC1D21Q8IYX1 336 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 OR8H2Q8N162 312 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 PTGR2Q8N8N7 351 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-216ENST00000556083 KAT5Q92993 513 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 DNAJC19Q96DA6 116 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 CDRT15Q96T59 188 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 HDHD2Q9H0R4 259 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 CDH19Q9H159 772 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 SLC24A3Q9HC58 644 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 SMPD4Q9NXE4 827 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
ACTN1-216ENST00000556083 DUSP10Q9Y6W6 482 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms