RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 EFHC2Q5JST6 749 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 LRRC73Q5JTD7 316 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 ARTNQ5T4W7 220 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 ATXN7L2Q5T6C5 722 aaPredicted RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 MANEALQ5VSG8 457 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 SFMBT2Q5VUG0 894 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 DNAJC24Q6P3W2 148 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 WDR59Q6PJI9 974 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 GCNT7Q6ZNI0 430 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 Q6ZSR6 202 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 PARS2Q7L3T8 475 aaKnown RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 STRADAQ7RTN6 431 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 KANSL1Q7Z3B3 1105 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 SLFN11Q7Z7L1 901 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 PYROXD2Q8N2H3 581 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 SLC25A45Q8N413 288 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 MEIOBQ8N635 442 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 NETO2Q8NC67 525 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 ARHGEF2Q92974 986 aaKnown RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 NXPE2Q96DL1 559 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 LRIG1Q96JA1 1093 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 FEM1CQ96JP0 617 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 SLC17A9Q9BYT1 436 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 OSBPL2Q9H1P3 480 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 MAGEH1Q9H213 219 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 KLHL11Q9NVR0 708 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF358Q9NW07 568 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 TMEM248Q9NWD8 314 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 UCKL1Q9NWZ5 548 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 IPO11Q9UI26 975 aaKnown RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 ITM2BQ9Y287 266 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 FADS3Q9Y5Q0 445 aa6.8□□□□□ -1.32
PSEN1-216ENST00000556066 DNMT3AQ9Y6K1 912 aaPredicted RBP6.8□□□□□ -1.32
PSEN1-216ENST00000556066 PTPRQQ9UMZ3 2332 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 KIF26BQ2KJY2 2108 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 POM121BA6NF01 834 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 IGLON5A6NGN9 336 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 SIGLEC16A6NMB1 481 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 TMCO5BA8MYB1 307 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 RAD51BO15315 384 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 CCP110O43303 1012 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 PIAS2O75928 621 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 NEBLO76041 1014 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 TMCC1O94876 653 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 POP4O95707 220 aaKnown RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 CD160O95971 181 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 UGT2B4P06133 528 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 ALPPL2P10696 532 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 BMP2P12643 396 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 MYF5P13349 255 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 DESP17661 470 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 EPHB2P29323 1055 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 RPL7AP62424 266 aaKnown RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 NRG1Q02297 640 aaPredicted RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 PTP4A2Q12974 167 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF211Q13398 564 aaPredicted RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 ILKQ13418 452 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 FGL2Q14314 439 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF805Q5CZA5 627 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 KIAA1161Q6NSJ0 714 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 DCUN1D2Q6PH85 259 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 KDM7AQ6ZMT4 941 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF662Q6ZS27 426 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 RBM43Q6ZSC3 357 aaKnown RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 MON1BQ7L1V2 547 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 ABI3BPQ7Z7G0 1075 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 NLRP14Q86W24 1093 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 PHF13Q86YI8 300 aaPredicted RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 SLC22A18ASQ8N1D0 253 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 AOPEPQ8N6M6 819 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 C3orf20Q8ND61 904 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 OR2AP1Q8NGE2 309 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 OR4C6Q8NH72 309 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 CENPIQ92674 756 aaPredicted RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 ANP32BQ92688 251 aaKnown RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 NTAN1Q96AB6 310 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 ISG20Q96AZ6 181 aaKnown RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 PDLIM2Q96JY6 352 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 BMFQ96LC9 184 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 KLHL32Q96NJ5 620 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 MCEEQ96PE7 176 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 AGPAT1Q99943 283 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 DKK4Q9UBT3 224 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 LIMA1Q9UHB6 759 aaKnown RBP6.79□□□□□ -1.32
PSEN1-216ENST00000556066 GGT7Q9UJ14 662 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 CLCA2Q9UQC9 943 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 DAAM1Q9Y4D1 1078 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 HRH3Q9Y5N1 445 aa6.79□□□□□ -1.32
PSEN1-216ENST00000556066 PTPN13Q12923 2485 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 NEMP2A6NFY4 417 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 ZSCAN5CA6NGD5 496 aaPredicted RBP6.78□□□□□ -1.32
PSEN1-216ENST00000556066 CYSRT1A8MQ03 144 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 RASA4BC9J798 803 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 FPGTO14772 594 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 RASA4O43374 803 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 TSPAN6O43657 245 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 KDELR3O43731 214 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 AP1G1O43747 822 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 MMP20O60882 483 aa6.78□□□□□ -1.32
PSEN1-216ENST00000556066 IGSF6O95976 241 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms