RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SIRPB2Q5JXA9 342 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 FNBP1LQ5T0N5 605 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 C9orf64Q5T6V5 341 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 ARMC12Q5T9G4 340 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 EMBQ6PCB8 327 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 RANBP10Q6VN20 620 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 GDPD4Q6W3E5 623 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 CAND1Q86VP6 1230 aaKnown RBP11.13□□□□□ -0.63
TMEM260-208ENST00000555905 CAMK1DQ8IU85 385 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 SIX5Q8N196 739 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 STK40Q8N2I9 435 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 SLC25A41Q8N5S1 370 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 CHST14Q8NCH0 376 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 OR52K1Q8NGK4 314 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 GRIN3AQ8TCU5 1115 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 EZH1Q92800 747 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-208ENST00000555905 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 RMDN1Q96DB5 314 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 PWWP2AQ96N64 755 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 ACOX2Q99424 681 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 NELL2Q99435 816 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 TDRD1Q9BXT4 1180 aaKnown RBP11.13□□□□□ -0.63
TMEM260-208ENST00000555905 PHACTR1Q9C0D0 580 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 MTG2Q9H4K7 406 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 ZDHHC4Q9NPG8 344 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 CASS4Q9NQ75 786 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 BFARQ9NZS9 450 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 HCN2Q9UL51 889 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 RPL26L1Q9UNX3 145 aaKnown RBP11.13□□□□□ -0.63
TMEM260-208ENST00000555905 CHKBQ9Y259 395 aa11.13□□□□□ -0.63
TMEM260-208ENST00000555905 F5P12259 2224 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 SDR42E2A6NKP2 422 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 HTRA2O43464 458 aaPredicted RBP11.12□□□□□ -0.63
TMEM260-208ENST00000555905 RNASEH1O60930 286 aaKnown RBP11.12□□□□□ -0.63
TMEM260-208ENST00000555905 RNF40O75150 1001 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 AVILO75366 819 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 LEFTY1O75610 366 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 PGLSO95336 258 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 FGF1P05230 155 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 UGT2B4P06133 528 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 FAM153BP0C7A2 387 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 GRIA1P42261 906 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 WASP42768 502 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 EPHB1P54762 984 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 STARD6P59095 220 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 DHX9Q08211 1270 aaKnown RBP11.12□□□□□ -0.63
TMEM260-208ENST00000555905 TRAF2Q12933 501 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 PDIA2Q13087 525 aaKnown RBP11.12□□□□□ -0.63
TMEM260-208ENST00000555905 OLIG2Q13516 323 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 CCINQ13939 588 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 GALNT3Q14435 633 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 FAM153CQ494X1 144 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 ARSIQ5FYB1 569 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 EOGTQ5NDL2 527 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 ZNF534Q76KX8 674 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 NDUFAF2Q8N183 169 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 SYNPOQ8N3V7 929 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 IL17RCQ8NAC3 791 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 TXNDC5Q8NBS9 432 aaKnown RBP11.12□□□□□ -0.63
TMEM260-208ENST00000555905 TMIEQ8NEW7 156 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 LPCAT1Q8NF37 534 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
TMEM260-208ENST00000555905 LRRC39Q96DD0 335 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 NSMCE3Q96MG7 304 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 TRIB3Q96RU7 358 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 GABRG3Q99928 467 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 SUV39H2Q9H5I1 410 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 ARNT2Q9HBZ2 717 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 SAYSD1Q9NPB0 183 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 PRSS16Q9NQE7 514 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 PIH1D1Q9NWS0 290 aaKnown RBP11.12□□□□□ -0.63
TMEM260-208ENST00000555905 MUTYHQ9UIF7 546 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 PCDHB9Q9Y5E1 797 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 WASF2Q9Y6W5 498 aa11.12□□□□□ -0.63
TMEM260-208ENST00000555905 KANSL1LA0AUZ9 987 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 KRBA1A5PL33 1030 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 ANTXRLA6NF34 631 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 SHISA7A6NL88 538 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 E7ESA3 106 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 C1QTNF3-AMACRE9PGA6 284 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 TRAFD1O14545 582 aaPredicted RBP11.11□□□□□ -0.63
TMEM260-208ENST00000555905 CPP00450 1065 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 ATXN1LP0C7T5 689 aaKnown RBP11.11□□□□□ -0.63
TMEM260-208ENST00000555905 ALADP13716 330 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 HOXB2P14652 356 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 TPH1P17752 444 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 NFKBIAP25963 317 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 MGAT1P26572 445 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 MAGEA3P43357 314 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 MAGEA4P43358 317 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 CHRNA4P43681 627 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 GRIA4P48058 902 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 POLR2LP62875 67 aaKnown RBP11.11□□□□□ -0.63
TMEM260-208ENST00000555905 CBLBQ13191 982 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 MTM1Q13496 603 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 CAMK2GQ13555 558 aaPredicted RBP11.11□□□□□ -0.63
TMEM260-208ENST00000555905 UBXN2BQ14CS0 331 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 ZNF805Q5CZA5 627 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 FAM46CQ5VWP2 391 aa11.11□□□□□ -0.63
TMEM260-208ENST00000555905 DENND5AQ6IQ26 1287 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms