RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
SNX6-203ENST00000555416 ECHDC3Q96DC8 303 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 ZNF641Q96N77 438 aaPredicted RBP13.8□□□□□ -0.2
SNX6-203ENST00000555416 TUBGCP5Q96RT8 1024 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 NOD2Q9HC29 1040 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 GDF3Q9NR23 364 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 DTLQ9NZJ0 730 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 LCMT1Q9UIC8 334 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 COQ6Q9Y2Z9 468 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 ALG6Q9Y672 507 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 LRRK1Q38SD2 2015 aa13.8□□□□□ -0.2
SNX6-203ENST00000555416 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
SNX6-203ENST00000555416 PCDHGA12O60330 932 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 THEGLP0DJG4 465 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 SPINK2P20155 84 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 PMLP29590 882 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 CYLC1P35663 651 aaPredicted RBP13.79□□□□□ -0.2
SNX6-203ENST00000555416 MMP13P45452 471 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 CCT8P50990 548 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 SIM1P81133 766 aaPredicted RBP13.79□□□□□ -0.2
SNX6-203ENST00000555416 ZNF235Q14590 738 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 TMEM52BQ4KMG9 183 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 LRRC38Q5VT99 294 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 MFSD7Q6UXD7 560 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 B4GALNT4Q76KP1 1039 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 KANSL1Q7Z3B3 1105 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 TMTC1Q8IUR5 882 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 MAP7D3Q8IWC1 876 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 TEX26Q8N6G2 289 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 SETD7Q8WTS6 366 aaKnown RBP13.79□□□□□ -0.2
SNX6-203ENST00000555416 MAML1Q92585 1016 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 KLHDC7BQ96G42 594 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 SMIM14Q96QK8 99 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 MGME1Q9BQP7 344 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 LACRTQ9GZZ8 138 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 SLC32A1Q9H598 525 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 ATP13A3Q9H7F0 1226 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 NT5MQ9NPB1 228 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 MBNL1Q9NR56 388 aaKnown RBP13.79□□□□□ -0.2
SNX6-203ENST00000555416 WASF3Q9UPY6 502 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 PCDHGC4Q9Y5F7 938 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 PCDHGB2Q9Y5G2 931 aa13.79□□□□□ -0.2
SNX6-203ENST00000555416 A8MX80 341 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 HTRA2O43464 458 aaPredicted RBP13.78□□□□□ -0.2
SNX6-203ENST00000555416 SPOPO43791 374 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 SDC3O75056 442 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 SERPINA4P29622 427 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 CDC25BP30305 580 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 IGFALSP35858 605 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 MMP12P39900 470 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 SLC1A1P43005 524 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 RENBPP51606 427 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 AP1S1P61966 158 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 BCL2L1Q07817 233 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 ADCY2Q08462 1091 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 TRAF2Q12933 501 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 RALGDSQ12967 914 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 SGCGQ13326 291 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 GRM3Q14832 879 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 SPA17Q15506 151 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 TRIP6Q15654 476 aaKnown RBP13.78□□□□□ -0.2
SNX6-203ENST00000555416 SLC45A4Q5BKX6 768 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 ZNF542PQ5EBM4 170 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 MARC1Q5VT66 337 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 SLC9A4Q6AI14 798 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 BRAT1Q6PJG6 821 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 Q6ZSR6 202 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 RHOT1Q8IXI2 618 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNX6-203ENST00000555416 HCAR2Q8TDS4 363 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 SAP25Q8TEE9 199 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 KRT35Q92764 455 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 CENPTQ96BT3 561 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 TSGA13Q96PP4 275 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 LENG8Q96PV6 779 aaPredicted RBP13.78□□□□□ -0.2
SNX6-203ENST00000555416 NUDCD1Q96RS6 583 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 LGMNQ99538 433 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 GPR27Q9NS67 375 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 ATP8A1Q9Y2Q0 1164 aa13.78□□□□□ -0.2
SNX6-203ENST00000555416 A0A0A6YYK5 440 aaPredicted RBP13.77□□□□□ -0.21
SNX6-203ENST00000555416 A0A0U1RQS6 177 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 GOLGA8CPA6NN73 597 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 A6NNZ2 444 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 ZNF487B1APH4 448 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 MATN3O15232 486 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 FLRT2O43155 660 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 KRT10P13645 584 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 C6P13671 934 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 GM2AP17900 193 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 XPAP23025 273 aaPredicted RBP13.77□□□□□ -0.21
SNX6-203ENST00000555416 EPHA8P29322 1005 aaPredicted RBP13.77□□□□□ -0.21
SNX6-203ENST00000555416 CDKN2BP42772 138 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 RXRGP48443 463 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 DYNLT1P63172 113 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 DSC2Q02487 901 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 NIPAL4Q0D2K0 466 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 OVGP1Q12889 678 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 FZD2Q14332 565 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 TAZQ16635 292 aa13.77□□□□□ -0.21
SNX6-203ENST00000555416 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms