RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PAPOLBQ9NRJ5 636 aaKnown RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 TMEM45AQ9NWC5 275 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 PLEKHB1Q9UF11 243 aaPredicted RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 HAO1Q9UJM8 370 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 INTS6Q9UL03 887 aaKnown RBP5.62□□□□□ -1.51
VRK1-205ENST00000555402 FAM96BQ9Y3D0 163 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 CAPN7Q9Y6W3 813 aa5.62□□□□□ -1.51
VRK1-205ENST00000555402 A0A096LPK6 155 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 hCG_1807616A0A1W2PRN6 198 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 B4DLN1 442 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 F8W810 466 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 PRPF4O43172 522 aaKnown RBP eCLIP5.61□□□□□ -1.51
VRK1-205ENST00000555402 ALPLP05186 524 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 TMEM191BP0C7N4 346 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 EDN2P20800 178 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 RAD52P43351 418 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 SNX16P57768 344 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 CREB5Q02930 508 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 CHAF1BQ13112 559 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 CRYMQ14894 314 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 KRTAP27-1Q3LI81 207 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 ENTPD8Q5MY95 495 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 NCEH1Q6PIU2 408 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 SHC4Q6S5L8 630 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 TSSK4Q6SA08 328 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 CYP20A1Q6UW02 462 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 ZNF793Q6ZN11 406 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 ENOSF1Q7L5Y1 443 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 TBC1D26Q86UD7 250 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 TRIM74Q86UV6 250 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 TRIM73Q86UV7 250 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 ADGRF5Q8IZF2 1346 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 SRBD1Q8N5C6 995 aaKnown RBP5.61□□□□□ -1.51
VRK1-205ENST00000555402 WDTC1Q8N5D0 677 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 LRRC57Q8N9N7 239 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 TMEM170AQ8WVE7 144 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 NSUN4Q96CB9 384 aaKnown RBP5.61□□□□□ -1.51
VRK1-205ENST00000555402 COQ8BQ96D53 544 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 ERP27Q96DN0 273 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 CENPOQ9BU64 300 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 TUBB6Q9BUF5 446 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 ZNF335Q9H4Z2 1342 aaPredicted RBP5.61□□□□□ -1.51
VRK1-205ENST00000555402 SH2D4AQ9H788 454 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 KAT14Q9H8E8 782 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 FBRSL1Q9HCM7 1045 aaKnown RBP5.61□□□□□ -1.51
VRK1-205ENST00000555402 NCKIPSDQ9NZQ3 722 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 SLCO3A1Q9UIG8 710 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 TTLL3Q9Y4R7 772 aa5.61□□□□□ -1.51
VRK1-205ENST00000555402 TRBV5-7A0A0A0MS05 114 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 LIASO43766 372 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 TMCC2O75069 709 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 STARD3NLO95772 234 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 HEXAP06865 529 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 PCNAP12004 261 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 KRT10P13645 584 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 PTPN2P17706 415 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 ATP5F1P24539 256 aaPredicted RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 TMPRSS3P57727 454 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 NLRP5P59047 1200 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 NANOS2P60321 138 aaKnown RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 RPS13P62277 151 aaKnown RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 CFHR1Q03591 330 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 ZNF91Q05481 1191 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 RNPS1Q15287 305 aaKnown RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 TXNDC8Q6A555 127 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 CES5AQ6NT32 575 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 HMBOX1Q6NT76 420 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 KLHL35Q6PF15 583 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 TDRPQ86YL5 185 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 TAGAPQ8N103 731 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 CADM3Q8N126 398 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 OR8H2Q8N162 312 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 C17orf53Q8N3J3 647 aaPredicted RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 SLC25A41Q8N5S1 370 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 ZBTB8BQ8NAP8 495 aaPredicted RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 SNRNP27Q8WVK2 155 aaKnown RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 FAM120BQ96EK7 910 aaKnown RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 CALML4Q96GE6 196 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 ZC3HAV1LQ96H79 300 aaKnown RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 CMTM3Q96MX0 182 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 WDFY2Q96P53 400 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 SIN3AQ96ST3 1273 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 MAP7D2Q96T17 732 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 WDR6Q9NNW5 1121 aaKnown RBP5.6□□□□□ -1.51
VRK1-205ENST00000555402 RRP7BPQ9NSQ0 103 aa5.6□□□□□ -1.51
VRK1-205ENST00000555402 KIR2DS5A0A0G2JLQ3 304 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 C17orf102A2RUQ5 167 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 USP17L23D6RBM5 183 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 KIR2DS3K7RE56 304 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 BCAT2O15382 392 aaPredicted RBP5.59□□□□□ -1.51
VRK1-205ENST00000555402 OAZ2O95190 189 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 TFP02787 698 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 PORP16435 677 aaPredicted RBP5.59□□□□□ -1.51
VRK1-205ENST00000555402 GPR12P47775 334 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 GABRB2P47870 512 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 CLCN5P51795 746 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 PRAMEP78395 509 aa5.59□□□□□ -1.51
VRK1-205ENST00000555402 GAD2Q05329 585 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms