RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ITGA8P53708 1063 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 RHOAP61586 193 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 SLC20A2Q08357 652 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 AP1B1Q10567 949 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 SLC10A2Q12908 348 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-213ENST00000555386 CAMK2GQ13555 558 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-213ENST00000555386 TFDP3Q5H9I0 405 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 AFMIDQ63HM1 303 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 DEFB119Q8N690 84 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 CHST14Q8NCH0 376 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 OR2T3Q8NH03 318 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 FRS2Q8WU20 508 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 ATG4AQ8WYN0 398 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 PRCCQ92733 491 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-213ENST00000555386 P3H4Q92791 437 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 PTPRN2Q92932 1015 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 FAF2Q96CS3 445 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 MRGPRX1Q96LB2 322 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 HERPUD2Q9BSE4 406 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 ZDHHC6Q9H6R6 413 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 SEPT10Q9P0V9 454 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 CYP8B1Q9UNU6 501 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 R3HDM2Q9Y2K5 976 aaKnown RBP9.99□□□□□ -0.81
PSEN1-213ENST00000555386 FANCMQ8IYD8 2048 aa9.99□□□□□ -0.81
PSEN1-213ENST00000555386 hCG_1818297A0A087WSY0 165 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 MID1O15344 667 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 LIASO43766 372 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PRAMEF11O60813 436 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 NEBLO76041 1014 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 CD160O95971 181 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PECAM1P16284 738 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 METAP1P53582 386 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 COPAP53621 1224 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 SEC24CP53992 1094 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 NRLP54845 237 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 GEMIN4P57678 1058 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 RPS14P62263 151 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ENPP2Q13822 863 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 TFDP2Q14188 446 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PAFAH1B3Q15102 231 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 CYTH1Q15438 398 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ARSIQ5FYB1 569 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 HIBCHQ6NVY1 386 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 DPY19L3Q6ZPD9 716 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PRR23BQ6ZRT6 265 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 CEP68Q76N32 757 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ZC3H18Q86VM9 953 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 RIBC1Q8N443 379 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ZCCHC9Q8N567 271 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 CAMKK1Q8N5S9 505 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PAF1Q8N7H5 531 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PLD5Q8N7P1 536 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 NSMCE1Q8WV22 266 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 OR8D1Q8WZ84 308 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 NKD2Q969F2 451 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 CHMP6Q96FZ7 201 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 LGMNQ99538 433 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 CCDC77Q9BR77 488 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 CINPQ9BW66 212 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PHACTR1Q9C0D0 580 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PPCSQ9HAB8 311 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PPANQ9NQ55 473 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 DTLQ9NZJ0 730 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 HECAQ9UBI9 543 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 TLDC2A0PJX2 215 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PRR23AA6NEV1 266 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 FAM47DPA6NHR8 397 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 KPNA3O00505 521 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 INSIG1O15503 277 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 MAFKO60675 156 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ZNF821O75541 412 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 GJB3O75712 270 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PAPSS2O95340 614 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 DNTTP04053 509 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ITGAVP06756 1048 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 TDGF1P13385 188 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ZFXP17010 805 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 SLC8A1P32418 973 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 GARSP41250 739 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 CCNHP51946 323 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 PTPN5P54829 565 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 IL10RBQ08334 325 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ITKQ08881 620 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 SLC10A7Q0GE19 358 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 GALNT2Q10471 571 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ELAVL3Q14576 367 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ZNF235Q14590 738 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 LBRQ14739 615 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 STAT4Q14765 748 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 USP39Q53GS9 565 aaKnown RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 CARD16Q5EG05 197 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 GKAP1Q5VSY0 366 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 IZUMO3Q5VZ72 239 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 ZNF776Q68DI1 518 aaPredicted RBP9.98□□□□□ -0.81
PSEN1-213ENST00000555386 SLC9A4Q6AI14 798 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 C6orf89Q6UWU4 347 aa9.98□□□□□ -0.81
PSEN1-213ENST00000555386 MAMSTRQ6ZN01 415 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms