RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 IGLON5A6NGN9 336 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 C3orf70A6NLC5 250 aaPredicted RBP12.21□□□□□ -0.45
SRP54-206ENST00000555317 TLR4O00206 839 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 MATN3O15232 486 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 PJA2O43164 708 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 SOCS5O75159 536 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 ZRANB2O95218 330 aaKnown RBP eCLIP12.21□□□□□ -0.45
SRP54-206ENST00000555317 PTMAP06454 111 aaKnown RBP12.21□□□□□ -0.45
SRP54-206ENST00000555317 KRT10P13645 584 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 TIMP2P16035 220 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 CA4P22748 312 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 CETN2P41208 172 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 ARRB1P49407 418 aaPredicted RBP12.21□□□□□ -0.45
SRP54-206ENST00000555317 CCT8P50990 548 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 NOVA1P51513 510 aaKnown RBP12.21□□□□□ -0.45
SRP54-206ENST00000555317 FAM193AP78312 1265 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 AP1B1Q10567 949 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 HNRNPDQ14103 355 aaKnown RBP12.21□□□□□ -0.45
SRP54-206ENST00000555317 UGP2Q16851 508 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 TMEM259Q4ZIN3 620 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 TFDP3Q5H9I0 405 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 CCDC181Q5TID7 509 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 KAZNQ674X7 775 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 SLC9A4Q6AI14 798 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 MFSD7Q6UXD7 560 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 SPOCD1Q6ZMY3 1216 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 PTAR1Q7Z6K3 402 aaPredicted RBP12.21□□□□□ -0.45
SRP54-206ENST00000555317 TMEM139Q8IV31 216 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 CCDC13Q8IYE1 715 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 RCOR2Q8IZ40 523 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 SYCE1Q8N0S2 351 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 OXR1Q8N573 874 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 PLD5Q8N7P1 536 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 FAM174AQ8TBP5 190 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 HDAC11Q96DB2 347 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 KLHDC7BQ96G42 594 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 TSGA13Q96PP4 275 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 NUDCD1Q96RS6 583 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 MGME1Q9BQP7 344 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 WRAP53Q9BUR4 548 aaKnown RBP12.21□□□□□ -0.45
SRP54-206ENST00000555317 TSGA10Q9BZW7 698 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 FZD3Q9NPG1 666 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 PCDH12Q9NPG4 1184 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 TM7SF3Q9NS93 570 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 DTLQ9NZJ0 730 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 AMACRQ9UHK6 382 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 GGT7Q9UJ14 662 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 ZFR2Q9UPR6 939 aaKnown RBP12.21□□□□□ -0.45
SRP54-206ENST00000555317 ATP8A1Q9Y2Q0 1164 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 REXO2Q9Y3B8 237 aaKnown RBP12.21□□□□□ -0.45
SRP54-206ENST00000555317 PCDHB9Q9Y5E1 797 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 PCNX2A6NKB5 2137 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 TSPAN11A1L157 253 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 RCCD1A6NED2 376 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 A6NNZ2 444 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 FPGTO14772 594 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 AREL1O15033 823 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 MUSKO15146 869 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 YKT6O15498 198 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 ARHGAP6O43182 974 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 TM7SF2O76062 418 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 PEX11BO96011 259 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 CPP00450 1065 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 ZNF883P0CG24 379 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 CCNB1P14635 433 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 CES1P23141 567 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 CDKN2BP42772 138 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 CTSKP43235 329 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 NR2C2P49116 596 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 NXPH1P58417 271 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 MAXP61244 160 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 BNC1Q01954 994 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 PSAPL1Q6NUJ1 521 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 NDUFAF2Q8N183 169 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.2□□□□□ -0.46
SRP54-206ENST00000555317 UBL4BQ8N7F7 174 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 EXD1Q8NHP7 514 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 SETD7Q8WTS6 366 aaKnown RBP12.2□□□□□ -0.46
SRP54-206ENST00000555317 ANP32BQ92688 251 aaKnown RBP12.2□□□□□ -0.46
SRP54-206ENST00000555317 FATE1Q969F0 183 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 LGMNQ99538 433 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 SEMA3CQ99985 751 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 LACRTQ9GZZ8 138 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 BRD8Q9H0E9 1235 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 NOD2Q9HC29 1040 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 RBM22Q9NW64 420 aaKnown RBP eCLIP12.2□□□□□ -0.46
SRP54-206ENST00000555317 SEPT10Q9P0V9 454 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 CA5BQ9Y2D0 317 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 FNDC3AQ9Y2H6 1198 aaKnown RBP12.2□□□□□ -0.46
SRP54-206ENST00000555317 DUSP10Q9Y6W6 482 aa12.2□□□□□ -0.46
SRP54-206ENST00000555317 CEP295Q9C0D2 2601 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 A0A1W2PR77 199 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 TTC24A2A3L6 582 aaPredicted RBP12.19□□□□□ -0.46
SRP54-206ENST00000555317 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 C10orf142B7Z368 130 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 H0Y8X5 98 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 WNT9AO14904 365 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 LZTS3O60299 673 aaPredicted RBP12.19□□□□□ -0.46
SRP54-206ENST00000555317 CST8O60676 142 aa12.19□□□□□ -0.46
SRP54-206ENST00000555317 MMP20O60882 483 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms