RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 TRIM49D1C9J1S8 452 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 TBL1XO60907 577 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 AVILO75366 819 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 TULP3O75386 442 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 ALDH1A2O94788 518 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 PDGFBP01127 241 aaPredicted RBP17.58■□□□□ 0.4
SHOX-204ENST00000554971 SERPINB4P48594 390 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 GBE1Q04446 702 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 SIGLEC14Q08ET2 396 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 MPP7Q5T2T1 576 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 FAM91A1Q658Y4 838 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 STEAP4Q687X5 459 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 NCBP2-AS2Q69YL0 99 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 UNC5AQ6ZN44 842 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 RALGPS2Q86X27 583 aaPredicted RBP17.58■□□□□ 0.4
SHOX-204ENST00000554971 CTAGE3PQ8IX95 158 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 ZNF687Q8N1G0 1237 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 ACMSDQ8TDX5 336 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 EZH1Q92800 747 aaPredicted RBP17.58■□□□□ 0.4
SHOX-204ENST00000554971 TTC17Q96AE7 1141 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 ANKRD27Q96NW4 1050 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 RPRD1AQ96P16 312 aaPredicted RBP17.58■□□□□ 0.4
SHOX-204ENST00000554971 DDX50Q9BQ39 737 aaKnown RBP17.58■□□□□ 0.4
SHOX-204ENST00000554971 EBF2Q9HAK2 575 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 MOCS1Q9NZB8 636 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 DTLQ9NZJ0 730 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 FBXL21Q9UKT6 434 aa17.58■□□□□ 0.4
SHOX-204ENST00000554971 DRGXA6NNA5 263 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 GOLGA8RI6L899 631 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 BIRC5O15392 142 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 GLULP15104 373 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 ZNF135P52742 658 aaPredicted RBP17.57■□□□□ 0.4
SHOX-204ENST00000554971 SLC10A2Q12908 348 aaPredicted RBP17.57■□□□□ 0.4
SHOX-204ENST00000554971 PDK1Q15118 436 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 FSCBQ5H9T9 825 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 PRPF39Q86UA1 669 aaKnown RBP17.57■□□□□ 0.4
SHOX-204ENST00000554971 HJURPQ8NCD3 748 aaPredicted RBP17.57■□□□□ 0.4
SHOX-204ENST00000554971 C7orf26Q96N11 449 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 SRPK1Q96SB4 655 aaKnown RBP17.57■□□□□ 0.4
SHOX-204ENST00000554971 C8orf33Q9H7E9 229 aaPredicted RBP17.57■□□□□ 0.4
SHOX-204ENST00000554971 YY1AP1Q9H869 796 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 NPHS2Q9NP85 383 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 METTL18O95568 372 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 CISD3P0C7P0 127 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 PTPN4P29074 926 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 HLA-FP30511 346 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 ARFIP2P53365 341 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 STARD6P59095 220 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 ZNF318Q5VUA4 2279 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 LRRC8BQ6P9F7 803 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 TRIM67Q6ZTA4 783 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 ZNF534Q76KX8 674 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 CLNKQ7Z7G1 428 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 OR52K2Q8NGK3 314 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 FAM111AQ96PZ2 611 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 NDFIP2Q9NV92 336 aa17.57■□□□□ 0.4
SHOX-204ENST00000554971 MTF2Q9Y483 593 aaPredicted RBP17.57■□□□□ 0.4
SHOX-204ENST00000554971 SDR42E2A6NKP2 422 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 CYBBP04839 570 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 T-ENOLP0DO92 83 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 NEFHP12036 1026 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 HOXC13P31276 330 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 CRHR1P34998 444 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 GALK1P51570 392 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 PRKCQQ04759 706 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 KRT72Q14CN4 511 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 PON2Q15165 354 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 ANKRD20A2Q5SQ80 823 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 ANKRD20A1Q5TYW2 823 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 ANKRD20A3Q5VUR7 823 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 LMLNQ96KR4 655 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 KLF6Q99612 283 aaPredicted RBP17.56■□□□□ 0.4
SHOX-204ENST00000554971 BRD8Q9H0E9 1235 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 EPHX3Q9H6B9 360 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 PLAC1Q9HBJ0 212 aa17.56■□□□□ 0.4
SHOX-204ENST00000554971 NOP53Q9NZM5 478 aaKnown RBP17.56■□□□□ 0.4
SHOX-204ENST00000554971 A0A1B0GVM2 712 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 TCAF2A6NFQ2 919 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 TNFRSF10AO00220 468 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 CREB3O43889 395 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 RFPL1O75677 317 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 EIF2DP41214 584 aaKnown RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 HCAR3P49019 387 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 PAFAH1B3Q15102 231 aaKnown RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 TMEM196Q5HYL7 178 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 RABGAP1LQ5R372 815 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 WASHC2DQ5SRD0 308 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 ACBD5Q5T8D3 534 aaPredicted RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 CXorf57Q6NSI4 855 aaKnown RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 KIF2BQ8N4N8 673 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 CDKL2Q92772 493 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 STAMBPL1Q96FJ0 436 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 FOXQ1Q9C009 403 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 PPARGC1AQ9UBK2 798 aaKnown RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 CACNA1HO95180 2353 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 WDR91A4D1P6 747 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 NCAM2O15394 837 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 CCDC22O60826 627 aa17.55■□□□□ 0.4
SHOX-204ENST00000554971 LUC7L3O95232 432 aaKnown RBP17.55■□□□□ 0.4
SHOX-204ENST00000554971 GOT1P17174 413 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms