RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 RHAGQ02094 409 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PPIL2Q13356 520 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 IQSEC1Q6DN90 963 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 POTEHQ6S545 545 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 GPRIN3Q6ZVF9 776 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 PROSER1Q86XN7 944 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 ECHDC2Q86YB7 292 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 POMGNT2Q8NAT1 580 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 ARRDC4Q8NCT1 418 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 BBS4Q96RK4 519 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 EPB41L1Q9H4G0 881 aa14.05□□□□□ -0.16
VTI1B-204ENST00000554659 DCDC2CA8MYV0 355 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 TULP2O00295 520 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 AZIN1O14977 448 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 CATP04040 527 aaKnown RBP14.04□□□□□ -0.16
VTI1B-204ENST00000554659 KLHL24Q6TFL4 600 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 USP45Q70EL2 814 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 PLPPR4Q7Z2D5 763 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 DEPDC4Q8N2C3 294 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 LRRC57Q8N9N7 239 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 NDNQ99608 321 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 GORASP1Q9BQQ3 440 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 ADI1Q9BV57 179 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 FBXO5Q9UKT4 447 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 PDHXO00330 501 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 IDH3BO43837 385 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 TM7SF2O76062 418 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 TPSB2P20231 275 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 MMP8P22894 467 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 STAT5AP42229 794 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 IRF8Q02556 426 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 TPSAB1Q15661 275 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
VTI1B-204ENST00000554659 EFCAB3Q8N7B9 438 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 ZYG11BQ9C0D3 744 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 PCDH18Q9HCL0 1135 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 SSU72Q9NP77 194 aaKnown RBP14.04□□□□□ -0.16
VTI1B-204ENST00000554659 MRPS7Q9Y2R9 242 aaKnown RBP14.04□□□□□ -0.16
VTI1B-204ENST00000554659 MAGEC1O60732 1142 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 CBFA2T3O75081 653 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 ULK1O75385 1050 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 JAK1P23458 1154 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 GTF2E2P29084 291 aaKnown RBP14.04□□□□□ -0.16
VTI1B-204ENST00000554659 EIF3MQ7L2H7 374 aaKnown RBP14.04□□□□□ -0.16
VTI1B-204ENST00000554659 C12orf50Q8NA57 414 aaPredicted RBP14.04□□□□□ -0.16
VTI1B-204ENST00000554659 MRPL9Q9BYD2 267 aaKnown RBP14.04□□□□□ -0.16
VTI1B-204ENST00000554659 LGALS13Q9UHV8 139 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 MST1RQ04912 1400 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 MTRF1O75570 445 aaKnown RBP14.04□□□□□ -0.16
VTI1B-204ENST00000554659 OR6B1O95007 311 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 ITGA2P17301 1181 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 ERCC2P18074 760 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 ITGB5P18084 799 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 GSTM5P46439 218 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 PTP4A2Q12974 167 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 MZT2AQ6P582 158 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 ARHGAP36Q6ZRI8 547 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 KIAA0319LQ8IZA0 1049 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 PSMA8Q8TAA3 256 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 ZFYVE1Q9HBF4 777 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 CCNB1IP1Q9NPC3 277 aa14.04□□□□□ -0.16
VTI1B-204ENST00000554659 ABATP80404 500 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 COL9A3Q14050 684 aaPredicted RBP14.03□□□□□ -0.16
VTI1B-204ENST00000554659 GRIK5Q16478 980 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 AMIGO2Q86SJ2 522 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 OFCC1Q8IZS5 231 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 ATL1Q8WXF7 558 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 MTFMTQ96DP5 389 aaKnown RBP14.03□□□□□ -0.16
VTI1B-204ENST00000554659 Q96MT0 163 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 UROC1Q96N76 676 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 HOPXQ9BPY8 73 aaPredicted RBP14.03□□□□□ -0.16
VTI1B-204ENST00000554659 SENP6Q9GZR1 1112 aaPredicted RBP14.03□□□□□ -0.16
VTI1B-204ENST00000554659 N6AMT1Q9Y5N5 214 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 OTCP00480 354 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 CST1P01037 141 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 PAX3P23760 479 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 CRATP43155 626 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 AKR1D1P51857 326 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 USP46P62068 366 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 CATSPERGQ6ZRH7 1159 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 ZBTB46Q86UZ6 589 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 ZNF540Q8NDQ6 660 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 NKD2Q969F2 451 aaPredicted RBP14.03□□□□□ -0.16
VTI1B-204ENST00000554659 TLCD1Q96CP7 247 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 GAD1Q99259 594 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 NMUR2Q9GZQ4 415 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 RHOJQ9H4E5 214 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 CLN6Q9NWW5 311 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 DNAJC28Q9NX36 388 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 NUDT5Q9UKK9 219 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 NRCAMQ92823 1304 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 AKR1A1P14550 325 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 PTPRAP18433 802 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 RCVRNP35243 200 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 PLCL1Q15111 1095 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 GCNT7Q6ZNI0 430 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 ADAMTSL2Q86TH1 951 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 UBE2E3Q969T4 207 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 MLPHQ9BV36 600 aaPredicted RBP14.03□□□□□ -0.16
VTI1B-204ENST00000554659 STARD7Q9NQZ5 370 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms