RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 AMER2Q8N7J2 671 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 ENGASEQ8NFI3 743 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 ATL2Q8NHH9 583 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 SLC35B2Q8TB61 432 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 PARD3BQ8TEW8 1205 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 TFAP2CQ92754 450 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 CCDC127Q96BQ5 260 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 PCED1BQ96HM7 432 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 AHCYL2Q96HN2 611 aaKnown RBP4.4□□□□□ -1.71
VTI1B-203ENST00000554636 FUBP3Q96I24 572 aaKnown RBP eCLIP4.4□□□□□ -1.71
VTI1B-203ENST00000554636 GCNAQ96QF7 691 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 FNBP1Q96RU3 617 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF518BQ9C0D4 1074 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 GPR88Q9GZN0 384 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 SDCBP2Q9H190 292 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 DPEP3Q9H4B8 488 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 TASP1Q9H6P5 420 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 LDAHQ9H6V9 325 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 SMYD3Q9H7B4 428 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 TRPV5Q9NQA5 729 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 HEBP1Q9NRV9 189 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 DNAJC28Q9NX36 388 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 OBP2AQ9NY56 170 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 GTF3C4Q9UKN8 822 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 CDH9Q9ULB4 789 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 MTF2Q9Y483 593 aaPredicted RBP4.4□□□□□ -1.71
VTI1B-203ENST00000554636 GVINP1Q7Z2Y8 2422 aa4.4□□□□□ -1.71
VTI1B-203ENST00000554636 EP300Q09472 2414 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 B5MCH6 92 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF263O14978 683 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 CHADO15335 359 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 CALUO43852 315 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 AKAP3O75969 853 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 FAM163BP0C2L3 166 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 TRIM49P0CI25 452 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 TRIM49CP0CI26 452 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 KRT4P19013 534 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 CD72P21854 359 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 BDNFP23560 247 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 NR2F2P24468 414 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 DDX6P26196 483 aaKnown RBP eCLIP4.39□□□□□ -1.715e-9■□□□□ 8.9
VTI1B-203ENST00000554636 ZFP36P26651 326 aaKnown RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 MAGEA9P43362 315 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 VAMP7P51809 220 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 AP3M2P53677 418 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 CACNA2D1P54289 1103 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 PER3P56645 1201 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 RPL10AP62906 217 aaKnown RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 TNNC1P63316 161 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 ENPEPQ07075 957 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 PPP3CAQ08209 521 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 BIRC3Q13489 604 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 TRPC3Q13507 836 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 PNOCQ13519 176 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF268Q14587 947 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 UBXN2BQ14CS0 331 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF77Q15935 545 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 MUM1Q2TAK8 710 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 MST1LQ2TV78 715 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF699Q32M78 642 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 ARHGAP15Q53QZ3 475 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 COBLL1Q53SF7 1204 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 C19orf54Q5BKX5 351 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 MDH1BQ5I0G3 518 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 LAIR1Q6GTX8 287 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 SPOPLQ6IQ16 392 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 VSTM1Q6UX27 236 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 SCARA5Q6ZMJ2 495 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 C4orf50Q6ZRC1 276 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 GDF7Q7Z4P5 450 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 MON1AQ86VX9 555 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 SPATA2LQ8IUW3 424 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 ARID3BQ8IVW6 561 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 SCN4BQ8IWT1 228 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 GUF1Q8N442 669 aaKnown RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 OR6B3Q8NGW1 331 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 SPATA20Q8TB22 786 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 MYCBPAPQ8TBZ2 947 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 BPIFB1Q8TDL5 484 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 ATOH1Q92858 354 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 USP13Q92995 863 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 CCDC47Q96A33 483 aaKnown RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 SYAP1Q96A49 352 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 CLDN23Q96B33 292 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 ZFYVE19Q96K21 471 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 SPATA17Q96L03 361 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 MMS19Q96T76 1030 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 TRMT61BQ9BVS5 477 aaKnown RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 TTLL2Q9BWV7 592 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 SLC46A2Q9BY10 475 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 BRD9Q9H8M2 597 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 APOBEC3GQ9HC16 384 aaKnown RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 HPS4Q9NQG7 708 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 PRMT8Q9NR22 394 aaPredicted RBP4.39□□□□□ -1.71
VTI1B-203ENST00000554636 TMEM30AQ9NV96 361 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 GCNT4Q9P109 453 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 C11orf21Q9P2W6 132 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 HMGXB4Q9UGU5 601 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 CCL26Q9Y258 94 aa4.39□□□□□ -1.71
VTI1B-203ENST00000554636 PIAS3Q9Y6X2 628 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms