RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 RAMP2O60895 175 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 ZNF883P0CG24 379 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 CD38P28907 300 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 EPHB2P29323 1055 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 L1CAMP32004 1257 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 PTPN7P35236 360 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 SERPINH1P50454 418 aaKnown RBP12.62□□□□□ -0.39
SHMT2-214ENST00000554604 AIF1P55008 147 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
SHMT2-214ENST00000554604 OGDHQ02218 1023 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 SCAPQ12770 1279 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 KLF1Q13351 362 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-214ENST00000554604 SUZ12Q15022 739 aaKnown RBP12.62□□□□□ -0.39
SHMT2-214ENST00000554604 ACAP1Q15027 740 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 ARTNQ5T4W7 220 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 CFAP58Q5T655 872 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 POLNQ7Z5Q5 900 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 PRPF39Q86UA1 669 aaKnown RBP12.62□□□□□ -0.39
SHMT2-214ENST00000554604 PCDH20Q8N6Y1 951 aaKnown RBP12.62□□□□□ -0.39
SHMT2-214ENST00000554604 GOLGA6L1Q8N7Z2 621 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 TMIEQ8NEW7 156 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 GRK7Q8WTQ7 553 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 SERAC1Q96JX3 654 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 PKNOX2Q96KN3 472 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 SLC6A18Q96N87 628 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 CAMK1GQ96NX5 476 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 RUFY1Q96T51 708 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 EPAS1Q99814 870 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 ORAI3Q9BRQ5 295 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 CEP44Q9C0F1 390 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 MAGEH1Q9H213 219 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 NDFIP2Q9NV92 336 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 TMEM248Q9NWD8 314 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 IL36AQ9UHA7 158 aa12.62□□□□□ -0.39
SHMT2-214ENST00000554604 FEZ2Q9UHY8 353 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-214ENST00000554604 VILLO15195 856 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 PLRG1O43660 514 aaKnown RBP12.61□□□□□ -0.39
SHMT2-214ENST00000554604 ZMPSTE24O75844 475 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 ECEL1O95672 775 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 CTSLP07711 333 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 PSMA2P25787 234 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 MAT2AP31153 395 aaKnown RBP12.61□□□□□ -0.39
SHMT2-214ENST00000554604 ACVRL1P37023 503 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 PPP2CBP62714 309 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 PPP2CAP67775 309 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 ARF5P84085 180 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 SHC2P98077 582 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 POLD3Q15054 466 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-214ENST00000554604 TRIP6Q15654 476 aaKnown RBP12.61□□□□□ -0.39
SHMT2-214ENST00000554604 SLC45A4Q5BKX6 768 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 ARSIQ5FYB1 569 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 AGBL4Q5VU57 503 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 LRIG3Q6UXM1 1119 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 DPY19L3Q6ZPD9 716 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 NLRP14Q86W24 1093 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 PYROXD2Q8N2H3 581 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 CHST14Q8NCH0 376 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 ARHGEF2Q92974 986 aaKnown RBP12.61□□□□□ -0.39
SHMT2-214ENST00000554604 PPP1R16AQ96I34 528 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 ZIM3Q96PE6 472 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 OSBPL8Q9BZF1 889 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 DPH5Q9H2P9 285 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 EBF2Q9HAK2 575 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 ZDHHC18Q9NUE0 388 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 PSD3Q9NYI0 1048 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 VPS18Q9P253 973 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 KNTC1P50748 2209 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 IGF2RP11717 2491 aa12.61□□□□□ -0.39
SHMT2-214ENST00000554604 FLRT2O43155 660 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 LATO43561 262 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 DFNA5O60443 496 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 LEFTY1O75610 366 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 RNF8O76064 485 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 NUDT1P36639 197 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 CTSKP43235 329 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 CCT8P50990 548 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 CCNG2Q16589 344 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 SETMARQ53H47 684 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-214ENST00000554604 CARD16Q5EG05 197 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 NAPEPLDQ6IQ20 393 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 CCDC50Q8IVM0 306 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 RYBPQ8N488 228 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-214ENST00000554604 RTL3Q8N8U3 475 aaKnown RBP12.6□□□□□ -0.39
SHMT2-214ENST00000554604 RHBDD1Q8TEB9 315 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 FAM131CQ96AQ9 280 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 FMO2Q99518 471 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 HEPHQ9BQS7 1158 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 TXLNGYQ9BZA5 131 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 TM6SF2Q9BZW4 377 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 ZDHHC6Q9H6R6 413 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 CATSPERBQ9H7T0 1116 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 PREBQ9HCU5 417 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 DONSONQ9NYP3 566 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 GRHL1Q9NZI5 618 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 FZD10Q9ULW2 581 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 FCF1Q9Y324 198 aaKnown RBP12.6□□□□□ -0.39
SHMT2-214ENST00000554604 PCDHGB2Q9Y5G2 931 aa12.6□□□□□ -0.39
SHMT2-214ENST00000554604 ARID1BQ8NFD5 2236 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-214ENST00000554604 FRYQ5TBA9 3013 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms