RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SPATS2Q86XZ4 545 aaKnown RBP13.2□□□□□ -0.3
SHMT2-211ENST00000554310 CPNE8Q86YQ8 564 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 LRRC49Q8IUZ0 686 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 BBS5Q8N3I7 341 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 KCTD6Q8NC69 237 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 TSEN2Q8NCE0 465 aaKnown RBP13.2□□□□□ -0.3
SHMT2-211ENST00000554310 NSMCE1Q8WV22 266 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 ZNF592Q92610 1267 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 KLK6Q92876 244 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 FAF2Q96CS3 445 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 KLHDC7BQ96G42 594 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 CAMK1GQ96NX5 476 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 CDC6Q99741 560 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 MYOCQ99972 504 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 C1QTNF2Q9BXJ5 285 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 CALN1Q9BXU9 219 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 SLC17A9Q9BYT1 436 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 ITM2BQ9Y287 266 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 CA5BQ9Y2D0 317 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 MAP1BP46821 2468 aaKnown RBP13.2□□□□□ -0.3
SHMT2-211ENST00000554310 IGF2RP11717 2491 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 MFSD11O43934 449 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 MAFKO60675 156 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 TRIM16O95361 564 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 PEX11BO96011 259 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 CD48P09326 243 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 THEGLP0DJG4 465 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 RXRGP48443 463 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 TAS2R40P59535 323 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 FAM193AP78312 1265 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 IL9RQ01113 521 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 SLC10A7Q0GE19 358 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 FGL2Q14314 439 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 MESDQ14696 234 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 SHBQ15464 509 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 NCBP2-AS2Q69YL0 99 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 ERAP2Q6P179 960 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 SYT10Q6XYQ8 523 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 TTC7BQ86TV6 843 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 VSIG1Q86XK7 387 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 DCP2Q8IU60 420 aaKnown RBP13.19□□□□□ -0.3
SHMT2-211ENST00000554310 TP53INP2Q8IXH6 220 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 CCDC170Q8IYT3 715 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 CXorf40AQ8TE69 158 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 LENG8Q96PV6 779 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-211ENST00000554310 C1QTNF7Q9BXJ2 289 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 SUV39H2Q9H5I1 410 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 FZD3Q9NPG1 666 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 LUC7LQ9NQ29 371 aaKnown RBP13.19□□□□□ -0.3
SHMT2-211ENST00000554310 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 BTBD3Q9Y2F9 522 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 HS3ST3A1Q9Y663 406 aa13.19□□□□□ -0.3
SHMT2-211ENST00000554310 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-211ENST00000554310 IGLON5A6NGN9 336 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 ZNF487B1APH4 448 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 LCA5LO95447 670 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 TIMP2P16035 220 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 SLC1A1P43005 524 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 BCL2L1Q07817 233 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 GALNT2Q10471 571 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 FOXC1Q12948 553 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 MMRN1Q13201 1228 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 PAFAH1B3Q15102 231 aaKnown RBP13.18□□□□□ -0.3
SHMT2-211ENST00000554310 UGP2Q16851 508 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 ATP13A4Q4VNC1 1196 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 ANKRD20A8PQ5CZ79 823 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 RALGPS1Q5JS13 557 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 LRRC73Q5JTD7 316 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 ZFYVE27Q5T4F4 411 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 LRRC38Q5VT99 294 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 PTAR1Q7Z6K3 402 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-211ENST00000554310 OR13H1Q8NG92 308 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 PCDH19Q8TAB3 1148 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 RHBDD1Q8TEB9 315 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 SAP25Q8TEE9 199 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 SPOCK2Q92563 424 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 ECHDC3Q96DC8 303 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 KLF6Q99612 283 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-211ENST00000554310 MGME1Q9BQP7 344 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 DESI2Q9BSY9 194 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 L2HGDHQ9H9P8 463 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 GPR27Q9NS67 375 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 ATP8A1Q9Y2Q0 1164 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 LRRK1Q38SD2 2015 aa13.18□□□□□ -0.3
SHMT2-211ENST00000554310 A0A1W2PQ67 120 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 LRRD1A4D1F6 860 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 FPGTO14772 594 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 MUSKO15146 869 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 RAD51BO15315 384 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 BUB1BO60566 1050 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-211ENST00000554310 SOCS5O75159 536 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 TM7SF2O76062 418 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 PAK4O96013 591 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-211ENST00000554310 ITGAVP06756 1048 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 FTH1P19P0C7X4 201 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 CR2P20023 1033 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 MX2P20592 715 aa13.17□□□□□ -0.3
SHMT2-211ENST00000554310 CYLC1P35663 651 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-211ENST00000554310 MMP12P39900 470 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms