RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 IL31RAQ8NI17 732 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 UHMK1Q8TAS1 419 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 CCDC110Q8TBZ0 833 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 PYROXD1Q8WU10 500 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 LZICQ8WZA0 190 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 JADE3Q92613 823 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ZNF75CPQ92670 426 aaPredicted RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 SLC7A6OSQ96CW6 309 aaPredicted RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 LRRC39Q96DD0 335 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 APOPT1Q96IL0 206 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 C7orf26Q96N11 449 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 FNBP1Q96RU3 617 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 CBWD1Q9BRT8 395 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 MRPL4Q9BYD3 311 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 IQCGQ9H095 443 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 WWP1Q9H0M0 922 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 SMOC1Q9H4F8 434 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 VPS37BQ9H9H4 285 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 AGO4Q9HCK5 861 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 PNPLA8Q9NP80 782 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 KMT5AQ9NQR1 393 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 PAPOLBQ9NRJ5 636 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 DDX43Q9NXZ2 648 aaKnown RBP6.06□□□□□ -1.44
VPS33B-203ENST00000554264 MYOTQ9UBF9 498 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ASH2LQ9UBL3 628 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 BCAP29Q9UHQ4 241 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ZNF180Q9UJW8 692 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 CBLCQ9ULV8 474 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ZNF148Q9UQR1 794 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 ASB3Q9Y575 518 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 PCDHB4Q9Y5E5 795 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 UBIAD1Q9Y5Z9 338 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 KMT2EQ8IZD2 1858 aa6.06□□□□□ -1.44
VPS33B-203ENST00000554264 TCRBV7S2A1N4TA0A589 114 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 TCRBV16S1A1N1A0A5B0 115 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MBLAC1A4D2B0 266 aaPredicted RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 M0QZ92 97 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 TRDMT1O14717 391 aaKnown RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 PLD2O14939 933 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 HNRNPDLO14979 420 aaKnown RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 BIRC5O15392 142 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MED7O43513 233 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 NUAK1O60285 661 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 KRT37O76014 449 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 LRG1P02750 347 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MT-ND3P03897 115 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 DHRS4L1P0CG22 281 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 HOXB8P17481 243 aaPredicted RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 DESP17661 470 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 STIP1P31948 543 aaKnown RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 CDH5P33151 784 aaPredicted RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 SSR1P43307 286 aaKnown RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 SERPINB9P50453 376 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 NOMO3P69849 1222 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ZBTB16Q05516 673 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MGAT5Q09328 741 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MAMLD1Q13495 774 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 SNX1Q13596 522 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MTMR1Q13613 665 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 CUL2Q13617 745 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 OASLQ15646 514 aaKnown RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 DUSP6Q16828 381 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 VMACQ2NL98 169 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 PAN2Q504Q3 1202 aaKnown RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 TAF1BQ53T94 588 aaPredicted RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ZNF385BQ569K4 471 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 SNX30Q5VWJ9 437 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ANO7Q6IWH7 933 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ANKRD54Q6NXT1 300 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 AADACL2Q6P093 401 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 LVRNQ6Q4G3 990 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MTHFD1LQ6UB35 978 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 KYAT3Q6YP21 454 aaKnown RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 TMEM184AQ6ZMB5 413 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ETV3LQ6ZN32 361 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ARCQ7LC44 396 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 OTOAQ7RTW8 1153 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 STK32CQ86UX6 486 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 OSTM1Q86WC4 334 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 TMEM126BQ8IUX1 230 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 EXOC8Q8IYI6 725 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ZBED8Q8IZ13 594 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 TTC39CQ8N584 583 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 TMEM35BQ8NCS4 154 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 TEKT4Q8WW24 435 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 POMGNT1Q8WZA1 660 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 PRCCQ92733 491 aaPredicted RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 SKA1Q96BD8 255 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 FAM136AQ96C01 138 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 PWWP2AQ96N64 755 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 SLITRK1Q96PX8 696 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 ZNF184Q99676 751 aaPredicted RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 PAIP2Q9BPZ3 127 aaKnown RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 CENPKQ9BS16 269 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 TSSK1BQ9BXA7 367 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 PCIF1Q9H4Z3 704 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 DHX33Q9H6R0 707 aaKnown RBP6.05□□□□□ -1.44
VPS33B-203ENST00000554264 MANSC1Q9H8J5 431 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 PRDM16Q9HAZ2 1276 aa6.05□□□□□ -1.44
VPS33B-203ENST00000554264 DMAP1Q9NPF5 467 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms