RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 FILIP1LQ4L180 1135 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 SOWAHCQ53LP3 525 aaPredicted RBP6.68□□□□□ -1.34
SLIRP-203ENST00000554074 ERMARDQ5T6L9 678 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 AFMIDQ63HM1 303 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 BRAT1Q6PJG6 821 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 LVRNQ6Q4G3 990 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 IGF2-ASQ6U949 168 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 MACC1Q6ZN28 852 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 LRRC69Q6ZNQ3 347 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF354CQ86Y25 554 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 LSMEM2Q8N112 164 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 AOPEPQ8N6M6 819 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 TP53I13Q8NBR0 393 aaPredicted RBP6.68□□□□□ -1.34
SLIRP-203ENST00000554074 TPCN2Q8NHX9 752 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 WDR48Q8TAF3 677 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 CXorf40AQ8TE69 158 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 HNRNPLLQ8WVV9 542 aaKnown RBP6.68□□□□□ -1.34
SLIRP-203ENST00000554074 SPOCK2Q92563 424 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 FGF11Q92914 225 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 GLMNQ92990 594 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 IQCDQ96DY2 449 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 IL12RB2Q99665 862 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 NCAPGQ9BPX3 1015 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 BOCQ9BWV1 1114 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 EDEM3Q9BZQ6 932 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 KLC2Q9H0B6 622 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 AIPL1Q9NZN9 384 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 SPASTQ9UBP0 616 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 IPO11Q9UI26 975 aaKnown RBP6.68□□□□□ -1.34
SLIRP-203ENST00000554074 KLF15Q9UIH9 416 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 AP4E1Q9UPM8 1137 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 ITM2BQ9Y287 266 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 AK5Q9Y6K8 562 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 MGAQ8IWI9 3026 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 LAMA5O15230 3695 aa6.68□□□□□ -1.34
SLIRP-203ENST00000554074 TMEM191CA6NGB0 347 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 LRRC53A6NM62 1247 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 EEF2KO00418 725 aaKnown RBP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 TEX33O43247 280 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 BRINP1O60477 761 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 MMP20O60882 483 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 TCEA3O75764 348 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 NEBLO76041 1014 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 RNF8O76064 485 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 TPM3P06753 285 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 MYBL1P10243 752 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 XPAP23025 273 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 PSMA2P25787 234 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 PCK1P35558 622 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 MMP12P39900 470 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 MLLT3P42568 568 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 LSSP48449 732 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 RPIAP49247 311 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 BLKP51451 505 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ERVPABLB-1P60509 514 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 SEMG2Q02383 582 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 PPARDQ03181 441 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 NSUN2Q08J23 767 aaKnown RBP eCLIP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 LRRC14Q15048 493 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ASIC2Q16515 512 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 UGP2Q16851 508 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF542PQ5EBM4 170 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 FIGNQ5HY92 759 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 TPRG1LQ5T0D9 272 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 C6orf132Q5T0Z8 1188 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 TMCO4Q5TGY1 634 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 KDM7AQ6ZMT4 941 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 LEKR1Q6ZMV7 388 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 RFX8Q6ZV50 586 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 CYP4V2Q6ZWL3 525 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 VPS36Q86VN1 386 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 PHACTR4Q8IZ21 702 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 FSTL5Q8N475 847 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 LZTR1Q8N653 840 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ARFGAP1Q8N6T3 406 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 LSM14AQ8ND56 463 aaKnown RBP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ATL2Q8NHH9 583 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 IFI44Q8TCB0 444 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 NAT6Q93015 286 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 COL26A1Q96A83 441 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ECHDC3Q96DC8 303 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 TRIM11Q96F44 468 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF578Q96N58 590 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF599Q96NL3 588 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 DCBLD2Q96PD2 775 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 UBL7Q96S82 380 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 LRRC61Q9BV99 259 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 SLC13A1Q9BZW2 595 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ABCG4Q9H172 646 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 SUV39H2Q9H5I1 410 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 PRORYQ9H606 182 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 ATP13A3Q9H7F0 1226 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 CBX8Q9HC52 389 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 TAS2R14Q9NYV8 317 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 APOBEC3BQ9UH17 382 aaKnown RBP6.67□□□□□ -1.34
SLIRP-203ENST00000554074 SCINQ9Y6U3 715 aa6.67□□□□□ -1.34
SLIRP-203ENST00000554074 A0A1B0GTH6 734 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 A0A1W2PQ67 120 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 J3KR12 359 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 TK2O00142 265 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms