RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 HNRNPA1L2Q32P51 320 aaKnown RBP10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 FBXO43Q4G163 708 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 SIRPB2Q5JXA9 342 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 HP1BP3Q5SSJ5 553 aaPredicted RBP10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 GDPD4Q6W3E5 623 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 DPY19L3Q6ZPD9 716 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 C3orf62Q6ZUJ4 267 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 ZNF534Q76KX8 674 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 NLRP9Q7RTR0 991 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 CROCCP2Q86T23 111 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 CHPFQ8IZ52 775 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 ZNF513Q8N8E2 541 aaPredicted RBP10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 LPCAT1Q8NF37 534 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 OR2A12Q8NGT7 310 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 OR6K2Q8NGY2 324 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 GABPB2Q8TAK5 448 aaPredicted RBP10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 FRS2Q8WU20 508 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 OR8D1Q8WZ84 308 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 FAM3CQ92520 227 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 CFAP36Q96G28 342 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 PKNOX2Q96KN3 472 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 SIGLEC10Q96LC7 697 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 TDRD1Q9BXT4 1180 aaKnown RBP10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 TXLNGYQ9BZA5 131 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 CDC42EP4Q9H3Q1 356 aaKnown RBP10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 SUV39H2Q9H5I1 410 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 VIPAS39Q9H9C1 493 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 PIH1D1Q9NWS0 290 aaKnown RBP10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 NINJ2Q9NZG7 142 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 HACD3Q9P035 362 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 THAP10Q9P2Z0 257 aaPredicted RBP10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 IL36AQ9UHA7 158 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 MRPS17Q9Y2R5 130 aaKnown RBP10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 PCDHB9Q9Y5E1 797 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 TEX264Q9Y6I9 313 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 NUP205Q92621 2012 aa10.55□□□□□ -0.72
TMEM55B-205ENST00000554028 ANKRD66B4E2M5 251 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 RIPK2O43353 540 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 ZNF821O75541 412 aaPredicted RBP10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 ACSL3O95573 720 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 CRTAMO95727 393 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 EPHX1P07099 455 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 IVLP07476 585 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 PAMP19021 973 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 STX2P32856 288 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 GRIA4P48058 902 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 MRPS21P82921 87 aaKnown RBP10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 PDE1BQ01064 536 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 TRAF2Q12933 501 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 MTM1Q13496 603 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 OLIG2Q13516 323 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 SEPT6Q14141 434 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 GALNT3Q14435 633 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 SLC29A2Q14542 456 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 ELAVL3Q14576 367 aaKnown RBP10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 STARD3Q14849 445 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 POU6F1Q14863 301 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 PON2Q15165 354 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 MSS51Q4VC12 460 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 TMEM196Q5HYL7 178 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 SPANXN3Q5MJ09 141 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 CERCAMQ5T4B2 595 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 FAM46CQ5VWP2 391 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 DENND5AQ6IQ26 1287 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 ZNF852Q6ZMS4 543 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 DENND4AQ7Z401 1863 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 CAMK1DQ8IU85 385 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 GOLGA6L1Q8N7Z2 621 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 HCAR2Q8TDS4 363 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 PTPRN2Q92932 1015 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 MYO19Q96H55 970 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 PPP1R16AQ96I34 528 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 SHDQ96IW2 340 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 DYRK4Q9NR20 520 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 PHTF1Q9UMS5 762 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 DUSP12Q9UNI6 340 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 SORCS3Q9UPU3 1222 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 STON1Q9Y6Q2 735 aa10.54□□□□□ -0.72
TMEM55B-205ENST00000554028 NYNRINQ9P2P1 1898 aaKnown RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 FAM237BA0A1B0GVD1 139 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 GOLGA6L10A6NI86 522 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 C2orf81A6NN90 581 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 C1QTNF3-AMACRE9PGA6 284 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 DLL1O00548 723 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 HTRA2O43464 458 aaPredicted RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 NARSO43776 548 aaKnown RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 BANF1O75531 89 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 GJB3O75712 270 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 PGLSO95336 258 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 PIGNO95427 931 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 UGT2B4P06133 528 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 ABHD2P08910 425 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 ATXN1LP0C7T5 689 aaKnown RBP10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 NTSR1P30989 418 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 CHRNA4P43681 627 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 SEC13P55735 322 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 PRKCQQ04759 706 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 CCDC15Q0P6D6 951 aa10.53□□□□□ -0.72
TMEM55B-205ENST00000554028 MESP2Q0VG99 397 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms