RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PIGHQ14442 188 aaPredicted RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 DLG2Q15700 870 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 POM121L1PQ3SYA9 428 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 ZC3H12AQ5D1E8 599 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 TTC39BQ5VTQ0 682 aaPredicted RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 CXorf57Q6NSI4 855 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 GUSBP11Q6P575 273 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 KYAT3Q6YP21 454 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 Q6ZSR6 202 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 EFL1Q7Z2Z2 1120 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 LGI2Q8N0V4 545 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 CCAR2Q8N163 923 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 NIPA2Q8N8Q9 360 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF548Q8NEK5 533 aaPredicted RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF564Q8TBZ8 553 aaPredicted RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 RNF34Q969K3 372 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 NTAN1Q96AB6 310 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 ARHGEF26Q96DR7 871 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 LIN37Q96GY3 246 aaPredicted RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 LENG8Q96PV6 779 aaPredicted RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 PPP1R9BQ96SB3 815 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 FEM1AQ9BSK4 669 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 BOCQ9BWV1 1114 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 HDAC8Q9BY41 377 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 TRIM4Q9C037 500 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 WDCPQ9H6R7 721 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 PIGVQ9NUD9 493 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 ARHGEF38Q9NXL2 777 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 ANAPC7Q9UJX3 599 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 ZFR2Q9UPR6 939 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 SPENQ96T58 3664 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 LRRK2Q5S007 2527 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 SYNJ2BP-COX16A0A087WUM0 186 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 TCAF2A6NFQ2 919 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 A6NNZ2 444 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 PJA2O43164 708 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 CCP110O43303 1012 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 AQP9O43315 295 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 RNF8O76064 485 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 PROSCO94903 275 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 CTSLP07711 333 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 PRLRP16471 622 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 TFE3P19532 575 aaPredicted RBP7.85□□□□□ -1.15
ABCD4-220ENST00000553998 MAN1A1P33908 653 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 ARHGAP25P42331 645 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 HDAC4P56524 1084 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 CLDN2P57739 230 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 CCZ1BP86790 482 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 CCZ1P86791 482 aaPredicted RBP7.85□□□□□ -1.15
ABCD4-220ENST00000553998 OGDHQ02218 1023 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 SERINC3Q13530 473 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 UBAP2LQ14157 1087 aaKnown RBP7.85□□□□□ -1.15
ABCD4-220ENST00000553998 NR0B2Q15466 257 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 CDKN3Q16667 212 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 C15orf59Q2T9L4 293 aaPredicted RBP7.85□□□□□ -1.15
ABCD4-220ENST00000553998 C5orf22Q49AR2 442 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 PERM1Q5SV97 790 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 RAP1GAP2Q684P5 730 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 ZSCAN30Q86W11 494 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 PARGQ86W56 976 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 PSTKQ8IV42 348 aaKnown RBP7.85□□□□□ -1.15
ABCD4-220ENST00000553998 SH2D3CQ8N5H7 860 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 OR2A12Q8NGT7 310 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 SLC35G2Q8TBE7 412 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 FAM172AQ8WUF8 416 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 ASB12Q8WXK4 309 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 ARRDC3Q96B67 414 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 C1orf74Q96LT6 269 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 TBATAQ96M53 351 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 HAPLN3Q96S86 360 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 CALN1Q9BXU9 219 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 TSGA10Q9BZW7 698 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 DNAJC28Q9NX36 388 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.85□□□□□ -1.15
ABCD4-220ENST00000553998 COX16Q9P0S2 106 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 KLF15Q9UIH9 416 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 HS3ST2Q9Y278 367 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 TBC1D30Q9Y2I9 924 aa7.85□□□□□ -1.15
ABCD4-220ENST00000553998 REXO2Q9Y3B8 237 aaKnown RBP7.85□□□□□ -1.15
ABCD4-220ENST00000553998 USP9XQ93008 2570 aaPredicted RBP7.85□□□□□ -1.15
ABCD4-220ENST00000553998 DOCK4Q8N1I0 1966 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 CPED1A4D0V7 1026 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 POM121BA6NF01 834 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 F5H5T6 163 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 H3BM21 787 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 TMX2-CTNND1H3BSU7 103 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 PLD2O14939 933 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 NVLO15381 856 aaKnown RBP7.84□□□□□ -1.15
ABCD4-220ENST00000553998 AP1G1O43747 822 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 PRPSAP2O60256 369 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 LRCH4O75427 683 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 MOCS2O96007 188 aaPredicted RBP7.84□□□□□ -1.15
ABCD4-220ENST00000553998 SRCP12931 536 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 SLC5A2P31639 672 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 CHRNA3P32297 505 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 ADRA1BP35368 520 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 SLC1A1P43005 524 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 RABIFP47224 123 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 RPIAP49247 311 aa7.84□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF135P52742 658 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms