RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ID4P47928 161 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 CCR5P51681 352 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 AFF3P51826 1226 aaKnown RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 C21orf59P57076 290 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 CNTN1Q12860 1018 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 DPYSQ14117 519 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 LBRQ14739 615 aaKnown RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 TCEAL1Q15170 157 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 SF3A2Q15428 464 aaKnown RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 ANKRD20A8PQ5CZ79 823 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 ARSJQ5FYB0 599 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 LRRC38Q5VT99 294 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 NEK5Q6P3R8 708 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 NCEH1Q6PIU2 408 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 IL27RAQ6UWB1 636 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 GDPD4Q6W3E5 623 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 ZSCAN30Q86W11 494 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 RFX6Q8HWS3 928 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 SLC41A1Q8IVJ1 513 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 ZCCHC9Q8N567 271 aaKnown RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 AADATQ8N5Z0 425 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 CHST14Q8NCH0 376 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 CCNYQ8ND76 341 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 CCDC112Q8NEF3 446 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 DNASE2BQ8WZ79 361 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 RAB7BQ96AH8 199 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 FEM1CQ96JP0 617 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 HDAC8Q9BY41 377 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 C6orf106Q9H6K1 298 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 PREBQ9HCU5 417 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 PARD6AQ9NPB6 346 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 CD93Q9NPY3 652 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 ATP13A2Q9NQ11 1180 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 TMEM9BQ9NQ34 198 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 AASDHPPTQ9NRN7 309 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 EIF2B4Q9UI10 523 aaKnown RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 PILRBQ9UKJ0 227 aa8.45□□□□□ -1.06
PSEN1-209ENST00000553855 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-209ENST00000553855 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 A0A1W2PQ67 120 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 ZNF487B1APH4 448 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 J3KR12 359 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 APOL1O14791 398 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 PSTPIP1O43586 416 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 PLRG1O43660 514 aaKnown RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 MAGEC1O60732 1142 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 RNGTTO60942 597 aaKnown RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 UGT2B4P06133 528 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 KRT10P13645 584 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 TCF4P15884 667 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 EPB42P16452 691 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 ENGP17813 658 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 COMTP21964 271 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 CA4P22748 312 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 KDELR1P24390 212 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 MAOBP27338 520 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 SERPINA4P29622 427 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 SUOXP51687 545 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 VAV2P52735 878 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 ADPRHP54922 357 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 HADHBP55084 474 aaKnown RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 TAS2R40P59535 323 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 POLR2LP62875 67 aaKnown RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 BCL2L1Q07817 233 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 ITKQ08881 620 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 SGCGQ13326 291 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 TFDP2Q14188 446 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 DPYSL3Q14195 570 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 PUM1Q14671 1186 aaKnown RBP eCLIP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 STAT4Q14765 748 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 RSPO4Q2I0M5 234 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 UAP1L1Q3KQV9 507 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 SETMARQ53H47 684 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 ZNF805Q5CZA5 627 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 ATXN7L2Q5T6C5 722 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 CCDC181Q5TID7 509 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 MARC1Q5VT66 337 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 TXNRD3NBQ6F5E7 133 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 C11orf63Q6NUN7 778 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 ERAP2Q6P179 960 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 SLC23A3Q6PIS1 610 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 CYP4V2Q6ZWL3 525 aaPredicted RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 TTC7BQ86TV6 843 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 VSIG1Q86XK7 387 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 CCDC50Q8IVM0 306 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 SYCE1Q8N0S2 351 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 OR6K2Q8NGY2 324 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 KIAA1524Q8TCG1 905 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 EPS8L3Q8TE67 593 aaKnown RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 BIRC7Q96CA5 298 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 RBM41Q96IZ5 413 aaKnown RBP8.44□□□□□ -1.06
PSEN1-209ENST00000553855 KLHL32Q96NJ5 620 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 TUBGCP5Q96RT8 1024 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 FERMT1Q9BQL6 677 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 RTKNQ9BST9 563 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 C1QTNF7Q9BXJ2 289 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 TSGA10Q9BZW7 698 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 SMOC1Q9H4F8 434 aa8.44□□□□□ -1.06
PSEN1-209ENST00000553855 NOL6Q9H6R4 1146 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms