RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 FBXO43Q4G163 708 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 FAM69BQ5VUD6 431 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 SHFQ7M4L6 423 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 MOGAT3Q86VF5 341 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 USP38Q8NB14 1042 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 ARRDC2Q8TBH0 407 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 RAB40AQ8WXH6 277 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 CNOT9Q92600 299 aaKnown RBP4.08□□□□□ -1.76
SCFD1-210ENST00000553693 SCMH1Q96GD3 660 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 NODALQ96S42 347 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 CD180Q99467 661 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 CYSLTR2Q9NS75 346 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 NDRG3Q9UGV2 375 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 PCDHAC2Q9Y5I4 1007 aa4.08□□□□□ -1.76
SCFD1-210ENST00000553693 C17orf113A0A1B0GUU1 675 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 hDV102S1A0JD36 115 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 J3KR12 359 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 PEX12O00623 359 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 TIPRLO75663 272 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 MTA2O94776 668 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 NDUFB4O95168 129 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 PCNAP12004 261 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 PTPN2P17706 415 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 CD58P19256 250 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 TCEA1P23193 301 aaKnown RBP4.07□□□□□ -1.76
SCFD1-210ENST00000553693 DGKAP23743 735 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 GRK6P43250 576 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 TROAPQ12815 778 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 TNFAIP1Q13829 316 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 RUNX2Q13950 521 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 TUBB8Q3ZCM7 444 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 SETMARQ53H47 684 aaPredicted RBP4.07□□□□□ -1.76
SCFD1-210ENST00000553693 CES5AQ6NT32 575 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 FAM122CQ6P4D5 195 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 TUBA1AQ71U36 451 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 NOL8Q76FK4 1167 aaKnown RBP4.07□□□□□ -1.76
SCFD1-210ENST00000553693 C2CD5Q86YS7 1000 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 LURAP1LQ8IV03 231 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 FTSJ3Q8IY81 847 aaKnown RBP4.07□□□□□ -1.76
SCFD1-210ENST00000553693 CPXM2Q8N436 756 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 FEM1CQ96JP0 617 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 TUBA1CQ9BQE3 449 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 STN1Q9H668 368 aaKnown RBP4.07□□□□□ -1.76
SCFD1-210ENST00000553693 UBTD1Q9HAC8 227 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 SMARCAL1Q9NZC9 954 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 ZNF224Q9NZL3 707 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 SLCO3A1Q9UIG8 710 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 FEM1BQ9UK73 627 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 PCDHGB5Q9Y5G0 923 aa4.07□□□□□ -1.76
SCFD1-210ENST00000553693 IGHV4OR15-8A0A075B7B6 117 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 CPED1A4D0V7 1026 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 PRAC2D3DTV9 90 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 NPIPB11E5RHQ5 1161 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 TULP2O00295 520 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 CEP104O60308 925 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 TSPAN3O60637 253 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 SOCS5O75159 536 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 PMS2P2O95744 297 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 AFPP02771 609 aaKnown RBP4.06□□□□□ -1.76
SCFD1-210ENST00000553693 CNPP09543 421 aaKnown RBP4.06□□□□□ -1.76
SCFD1-210ENST00000553693 GPTP24298 496 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 CHATP28329 748 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 SSTR2P30874 369 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 TBL3Q12788 808 aaKnown RBP4.06□□□□□ -1.76
SCFD1-210ENST00000553693 OS9Q13438 667 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-210ENST00000553693 ARHGEF6Q15052 776 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 PPP6R3Q5H9R7 873 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-210ENST00000553693 C9orf139Q6ZV77 190 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 DCUN1D3Q8IWE4 304 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 SPATA20Q8TB22 786 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 LMAN2LQ9H0V9 348 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 EPHX3Q9H6B9 360 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 EVA1AQ9H8M9 152 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 ALKBH4Q9NXW9 302 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 SIX4Q9UIU6 781 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 RIPOR2Q9Y4F9 1068 aa4.06□□□□□ -1.76
SCFD1-210ENST00000553693 NCAPD3P42695 1498 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 SERINC4A6NH21 518 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 CBY3A6NI87 242 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 HSPA12AO43301 675 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 RGS11O94810 467 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 GAS8-AS1O95177 125 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 SP1P08047 785 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 SRD5A1P18405 259 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 ANOS1P23352 680 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 RYKP34925 604 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 KRTAP24-1Q3LI83 254 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 ATP13A5Q4VNC0 1218 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 ESCO2Q56NI9 601 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 ANO1Q5XXA6 986 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 TBC1D26Q86UD7 250 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 ZC3HC1Q86WB0 502 aaKnown RBP4.05□□□□□ -1.76
SCFD1-210ENST00000553693 KCNH5Q8NCM2 988 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 NEK9Q8TD19 979 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 SORCS1Q8WY21 1168 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 CCT6BQ92526 530 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 RILPL2Q969X0 211 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 ZC3HAV1LQ96H79 300 aaKnown RBP4.05□□□□□ -1.76
SCFD1-210ENST00000553693 UHRF2Q96PU4 802 aa4.05□□□□□ -1.76
SCFD1-210ENST00000553693 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms