RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 ZSCAN30Q86W11 494 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 NLRP14Q86W24 1093 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 FAM72BQ86X60 149 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 CCDC185Q8N715 623 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 OR7D4Q8NG98 312 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 FAM172AQ8WUF8 416 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 EXTL1Q92935 676 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 LIN37Q96GY3 246 aaPredicted RBP11.99□□□□□ -0.49
SRP54-203ENST00000553544 LENG8Q96PV6 779 aaPredicted RBP11.99□□□□□ -0.49
SRP54-203ENST00000553544 CCDC3Q9BQI4 270 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 BOCQ9BWV1 1114 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 EDEM3Q9BZQ6 932 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 STRADBQ9C0K7 418 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 CBX8Q9HC52 389 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 SEPT11Q9NVA2 429 aaKnown RBP11.99□□□□□ -0.49
SRP54-203ENST00000553544 TAS2R14Q9NYV8 317 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 SEPT10Q9P0V9 454 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 SEPT3Q9UH03 358 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 PADI4Q9UM07 663 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 FLNCQ14315 2725 aa11.99□□□□□ -0.49
SRP54-203ENST00000553544 TLN1Q9Y490 2541 aaKnown RBP11.98□□□□□ -0.49
SRP54-203ENST00000553544 CXorf51AA0A1B0GTR3 108 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 LMO7DNF2Z398 122 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 PLD2O14939 933 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 RAD51BO15315 384 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 CCP110O43303 1012 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 SMAD6O43541 496 aaKnown RBP11.98□□□□□ -0.49
SRP54-203ENST00000553544 NOBOXO60393 691 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 ZNF821O75541 412 aaPredicted RBP11.98□□□□□ -0.49
SRP54-203ENST00000553544 LEFTY1O75610 366 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 LRIG2O94898 1065 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 ANXA6P08133 673 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 ITGB6P18564 788 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 TNFAIP3P21580 790 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 RRM1P23921 792 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 PBX1P40424 430 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 CLCN6P51797 869 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 NEK3P51956 506 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 PTK2BQ14289 1009 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 FGL2Q14314 439 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 PRRT3Q5FWE3 981 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 FIGNQ5HY92 759 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 DNAJC24Q6P3W2 148 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 RAB11FIP2Q7L804 512 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 JAMLQ86YT9 394 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 ZSCAN1Q8NBB4 408 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 CHST14Q8NCH0 376 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 GRIN3AQ8TCU5 1115 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 C1QTNF2Q9BXJ5 285 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 HAUS4Q9H6D7 363 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 SYNDIG1Q9H7V2 258 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 NDFIP2Q9NV92 336 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 FADS3Q9Y5Q0 445 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 ANKRD36A6QL64 1941 aa11.98□□□□□ -0.49
SRP54-203ENST00000553544 IGLON5A6NGN9 336 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 RNF103O00237 685 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 NTN3O00634 580 aaPredicted RBP11.97□□□□□ -0.49
SRP54-203ENST00000553544 YY2O15391 372 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 SPINT1O43278 529 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 TSPAN6O43657 245 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 AP1G1O43747 822 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 GCATO75600 419 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 CD160O95971 181 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 PLEKP08567 350 aaPredicted RBP11.97□□□□□ -0.49
SRP54-203ENST00000553544 FAM87AP0C7U9 286 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 GZMAP12544 262 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 ADRB3P13945 408 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 RHOQP17081 205 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 L1CAMP32004 1257 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 UGT1A5P35504 534 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 MAPKAPK2P49137 400 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 THOP1P52888 689 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 ARF5P84085 180 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 NFKB2Q00653 900 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 OGDHQ02218 1023 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 GNA12Q03113 381 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 SLC20A2Q08357 652 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 EIF2B5Q13144 721 aaKnown RBP11.97□□□□□ -0.49
SRP54-203ENST00000553544 C1orf61Q13536 156 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 TGIF1Q15583 401 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 PLEKHA7Q6IQ23 1121 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 PPP1R2P3Q6NXS1 205 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 LINGO4Q6UY18 593 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 DPY19L3Q6ZPD9 716 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 ZNF571Q7Z3V5 609 aaPredicted RBP11.97□□□□□ -0.49
SRP54-203ENST00000553544 LUZP1Q86V48 1076 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 SLC35F3Q8IY50 421 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 SCG3Q8WXD2 468 aaKnown RBP11.97□□□□□ -0.49
SRP54-203ENST00000553544 ASB12Q8WXK4 309 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 KLF6Q99612 283 aaPredicted RBP11.97□□□□□ -0.49
SRP54-203ENST00000553544 CNPY3Q9BT09 278 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 SLC13A1Q9BZW2 595 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 TNKS2Q9H2K2 1166 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 EPB41L5Q9HCM4 733 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 TMEM248Q9NWD8 314 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 ACSL6Q9UKU0 697 aa11.97□□□□□ -0.49
SRP54-203ENST00000553544 GOLGA6L19H0YKK7 550 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 DDX3XO00571 662 aaKnown RBP eCLIP11.96□□□□□ -0.492e-11■■■□□ 16.3
SRP54-203ENST00000553544 NEMP1O14524 444 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 NVLO15381 856 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms