RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 CUL4BQ13620 913 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 SYTL3Q4VX76 610 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 INO80DQ53TQ3 878 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-217ENST00000553287 DNTTIP2Q5QJE6 756 aaKnown RBP5.04□□□□□ -1.6
ATXN3-217ENST00000553287 HEPHL1Q6MZM0 1159 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 AADACL2Q6P093 401 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 GALNT7Q86SF2 657 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 BRSK2Q8IWQ3 736 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 ADHFE1Q8IWW8 467 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 ENAHQ8N8S7 591 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-217ENST00000553287 CEP76Q8TAP6 659 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 BICD2Q8TD16 824 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 NUDCD2Q8WVJ2 157 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 ABHD8Q96I13 439 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 FRG2BQ96QU4 278 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 HERC2P3Q9BVR0 1158 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 RMI1Q9H9A7 625 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 CHODLQ9H9P2 273 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 SAYSD1Q9NPB0 183 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 G6PC2Q9NQR9 355 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 OSGIN2Q9Y236 505 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 A0A1W2PP64 1363 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 MS4A18H0YCH9 400 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 LIASO43766 372 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 TGFB3P10600 412 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 PLA2G2AP14555 144 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 SKIV2L2P42285 1042 aaKnown RBP5.03□□□□□ -1.6
ATXN3-217ENST00000553287 PPP3CCP48454 512 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 AARSP49588 968 aaKnown RBP eCLIP5.03□□□□□ -1.6
ATXN3-217ENST00000553287 RHBDL3P58872 404 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 TMF1P82094 1093 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 CRYZQ08257 329 aaKnown RBP5.03□□□□□ -1.6
ATXN3-217ENST00000553287 DDR1Q08345 913 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 Q0VFX4 171 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 OS9Q13438 667 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-217ENST00000553287 TUBB8Q3ZCM7 444 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 RUNDC3AQ59EK9 446 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 Q6ZSV7 163 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 SPATA2LQ8IUW3 424 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-217ENST00000553287 ELP5Q8TE02 316 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 HDAC7Q8WUI4 952 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 KTI12Q96EK9 354 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-217ENST00000553287 MEIS3Q99687 375 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 SLCO5A1Q9H2Y9 848 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 KLHL31Q9H511 634 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 WNT16Q9UBV4 365 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 FZD10Q9ULW2 581 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 ICKQ9UPZ9 632 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 PLEKHG2Q9H7P9 1386 aa5.03□□□□□ -1.6
ATXN3-217ENST00000553287 EVPLQ92817 2033 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-217ENST00000553287 TARSL2A2RTX5 802 aaKnown RBP5.02□□□□□ -1.61
ATXN3-217ENST00000553287 C17orf102A2RUQ5 167 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 RNMTO43148 476 aaKnown RBP5.02□□□□□ -1.61
ATXN3-217ENST00000553287 FAM155BO75949 473 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 DDAH2O95865 285 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 ENO3P13929 434 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-217ENST00000553287 PNPLA4P41247 253 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 CLCNKBP51801 687 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 EGR4Q05215 589 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 PDCD2Q16342 344 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-217ENST00000553287 FSCBQ5H9T9 825 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 ZNF484Q5JVG2 852 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 ZDHHC23Q8IYP9 409 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 GALNT15Q8N3T1 639 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 MYCT1Q8N699 235 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 SCAIQ8N9R8 606 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 SLC35F5Q8WV83 523 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 SDCCAG3Q96C92 435 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 MED30Q96HR3 178 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 TEFMQ96QE5 360 aaKnown RBP5.02□□□□□ -1.61
ATXN3-217ENST00000553287 SIN3AQ96ST3 1273 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 FAM167BQ9BTA0 163 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 SEZ6LQ9BYH1 1024 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 KIF17Q9P2E2 1029 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 DHDHQ9UQ10 334 aa5.02□□□□□ -1.61
ATXN3-217ENST00000553287 PCDH11XQ9BZA7 1347 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 PCDH11YQ9BZA8 1340 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 CNTNAP2Q9UHC6 1331 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 EDC4Q6P2E9 1401 aaKnown RBP5.01□□□□□ -1.61
ATXN3-217ENST00000553287 NSD3Q9BZ95 1437 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 hCG_1642624A0A1W2PR95 340 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 GLTPD2A6NH11 291 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 DDTLA6NHG4 134 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-217ENST00000553287 VWA5AO00534 786 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 STRNO43815 780 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 CSF1P09603 554 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 MYZAPP0CAP1 466 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 HSPA8P11142 646 aaKnown RBP5.01□□□□□ -1.61
ATXN3-217ENST00000553287 VEGFAP15692 232 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-217ENST00000553287 RFC4P35249 363 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 RFC1P35251 1148 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-217ENST00000553287 MVDP53602 400 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 CDH12P55289 794 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 ARHGAP8P85298 464 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 DSC1Q08554 894 aa5.01□□□□□ -1.61
ATXN3-217ENST00000553287 THOC5Q13769 683 aaKnown RBP5.01□□□□□ -1.61
ATXN3-217ENST00000553287 KRT72Q14CN4 511 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms