RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 P3H1Q32P28 736 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 AASDHQ4L235 1098 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 ATXN7L2Q5T6C5 722 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 PIP5KL1Q5T9C9 394 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 NAPEPLDQ6IQ20 393 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 CACUL1Q86Y37 369 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 MFSD2AQ8NA29 543 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 CHST14Q8NCH0 376 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 CCHCR1Q8TD31 782 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 NETO1Q8TDF5 533 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 HTR3CQ8WXA8 447 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 KRT35Q92764 455 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 BIRC7Q96CA5 298 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 ECHDC3Q96DC8 303 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 IFT43Q96FT9 208 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 SLC17A9Q9BYT1 436 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 SLC6A17Q9H1V8 727 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 MTG2Q9H4K7 406 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 SARDHQ9UL12 918 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 INVSQ9Y283 1065 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 ATP8A1Q9Y2Q0 1164 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 FADS3Q9Y5Q0 445 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 GVINP1Q7Z2Y8 2422 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 ABCA7Q8IZY2 2146 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 SDK1Q7Z5N4 2213 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 GPR179Q6PRD1 2367 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 GOLGA6L10A0A0M3HER8 536 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 RGSL1A5PLK6 1076 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 AP3B1O00203 1094 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 KCNK3O14649 394 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 FPGTO14772 594 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 AREL1O15033 823 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 TM7SF2O76062 418 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 PEX11BO96011 259 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 CPP00450 1065 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 CFIP05156 583 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 CTSLP07711 333 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 ZNF883P0CG24 379 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 RBP3P10745 1247 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 PYGMP11217 842 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 CR2P20023 1033 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 CD38P28907 300 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 PTGER3P43115 390 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 ARRB1P49407 418 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 EIF3EP60228 445 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 YPEL5P62699 121 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 SRSF5Q13243 272 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 LAMB3Q13751 1172 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 PTK2BQ14289 1009 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 AGERQ15109 404 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 TMEM52BQ4KMG9 183 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 HS1BP3Q53T59 392 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 TRIM61Q5EBN2 209 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 ZDHHC20Q5W0Z9 365 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 DARS2Q6PI48 645 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 LEKR1Q6ZMV7 388 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 PRR23CQ6ZRP0 262 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 PARS2Q7L3T8 475 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 SCRN2Q96FV2 425 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 SERAC1Q96JX3 654 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 TEKT5Q96M29 485 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 QKIQ96PU8 341 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 LGMNQ99538 433 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 SEMA3CQ99985 751 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 HEMGNQ9BXL5 484 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 MIR1-1HGQ9H1L0 117 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 TRABDQ9H4I3 376 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 C6orf106Q9H6K1 298 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 ERVMER34-1Q9H9K5 563 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 AASDHPPTQ9NRN7 309 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 HACD3Q9P035 362 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 SEPT10Q9P0V9 454 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 KLHL8Q9P2G9 620 aaPredicted RBP10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 RNF14Q9UBS8 474 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 FAM153AQ9UHL3 310 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 EIF2B4Q9UI10 523 aaKnown RBP10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 PPIL1Q9Y3C6 166 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 TTLL3Q9Y4R7 772 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 CAPN6Q9Y6Q1 641 aa10.35□□□□□ -0.75
TRAFD1-208ENST00000552890 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 A0A1W2PQU0 124 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ANTXRLA6NF34 631 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ERI2A8K979 691 aaKnown RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 KCNK1O00180 336 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ARHGAP33O14559 1287 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 VILLO15195 856 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 PPFIA2O75334 1257 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 PGLSO95336 258 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 GAS8O95995 478 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ELFN1P0C7U0 828 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 TIMP2P16035 220 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 TCP1P17987 556 aaKnown RBP10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 KELP23276 732 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 ITPKAP23677 461 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 HTR1BP28222 390 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 RABIFP47224 123 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 GEMP55040 296 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 PDE1BQ01064 536 aa10.34□□□□□ -0.75
TRAFD1-208ENST00000552890 OTUD4Q01804 1114 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms