RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 UBE2SQ16763 222 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 EPC2Q52LR7 807 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 TCHHL1Q5QJ38 904 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 FNBP1LQ5T0N5 605 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 AGAP9Q5VTM2 703 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 AGAP6Q5VW22 663 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 KRT79Q5XKE5 535 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ACAD10Q6JQN1 1059 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 KRT80Q6KB66 452 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PMF1Q6P1K2 205 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 C8orf82Q6P1X6 216 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 KCTD8Q6ZWB6 473 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 TAS2R42Q7RTR8 314 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 OTOP3Q7RTS5 596 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PCGF5Q86SE9 256 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 CAND1Q86VP6 1230 aaKnown RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 GPBP1Q86WP2 473 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ELMOD2Q8IZ81 293 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 DSELQ8IZU8 1212 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 SHISA5Q8N114 240 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 CARNMT1Q8N4J0 409 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PPM1NQ8N819 430 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 KIAA1958Q8N8K9 716 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ANKRD53Q8N9V6 530 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 IL17RDQ8NFM7 739 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 RHOXF1Q8NHV9 184 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC7A14Q8TBB6 771 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PIWIL2Q8TC59 973 aaKnown RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 CPT1BQ92523 772 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 TRIM63Q969Q1 353 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 TTC17Q96AE7 1141 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 MAP6Q96JE9 813 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 SPATA17Q96L03 361 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 RIPOR3Q96MK2 946 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 AGAP4Q96P64 663 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 KLF6Q99612 283 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 STRA6Q9BX79 667 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 FRMD8P1Q9BZ68 369 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 RAD21L1Q9H4I0 556 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 VPS37BQ9H9H4 285 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 POLR1BQ9H9Y6 1135 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 TOPORSQ9NS56 1045 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ACOXLQ9NUZ1 547 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PAK1IP1Q9NWT1 392 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 MCM9Q9NXL9 1143 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 STMN3Q9NZ72 180 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PRKAG2Q9UGJ0 569 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF639Q9UID6 485 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 MOSPD1Q9UJG1 213 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 NUP50Q9UKX7 468 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 EMCNQ9ULC0 261 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 VANGL2Q9ULK5 521 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 DAGLAQ9Y4D2 1042 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 KLF2Q9Y5W3 355 aaPredicted RBP5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 PMF1-BGLAPU3KQ54 211 aa5.35□□□□□ -1.55
LSM3P2-201ENST00000551246 SCN7AQ01118 1682 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 C1orf232A0A0U1RR37 186 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 GSTTP1A0A1W2PQM5 241 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 RGSL1A5PLK6 1076 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PABPN1LA6NDY0 278 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SMCO2A6NFE2 343 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 H0Y858 1186 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 H7C0C1 242 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 hCG_1984214I3L0E3 225 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CCRL2O00421 344 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TRIM38O00635 465 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 COPEO14579 308 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TNPO2O14787 897 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TRIM24O15164 1050 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TLR3O15455 904 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PAPSS1O43252 624 aaPredicted RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SGTAO43765 313 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CCNT1O60563 726 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TADA2AO75478 443 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SNX4O95219 450 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ZSCAN5DPP0CG00 497 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 RALAP11233 206 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CDH1P12830 882 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PHKG2P15735 406 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 DDX5P17844 614 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 BTF3P20290 206 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PIK3R1P27986 724 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 GSTM2P28161 218 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SSTR1P30872 391 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ARRB2P32121 409 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PSMC2P35998 433 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 UGT2B10P36537 528 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TALDO1P37837 337 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 MAGEA6P43360 314 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PTPN9P43378 593 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CBX5P45973 191 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 GABRB2P47870 512 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PRKAA2P54646 552 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 EIF3EP60228 445 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TMPRSS15P98073 1019 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PRKCEQ02156 737 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CNTN2Q02246 1040 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PPP3CAQ08209 521 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 FSTL1Q12841 308 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms