RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	HTR7	P34969	479 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PCK1	P35558	622 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CCR3	P51677	355 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ZNF135	P52742	658 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	GALC	P54803	685 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	RPS24	P62847	133 aa	Known RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	MESP2	Q0VG99	397 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	MTAP	Q13126	283 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	LAPTM5	Q13571	262 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	SLC12A1	Q13621	1099 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ENPP2	Q13822	863 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PIGH	Q14442	188 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	DMC1	Q14565	340 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ZNF528	Q3MIS6	628 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	RABGAP1L	Q5R372	815 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	NAIF1	Q69YI7	327 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	GRAMD4	Q6IC98	578 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	FBXL22	Q6P050	247 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	RFWD3	Q6PCD5	774 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	LRRC31	Q6UY01	552 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	H2AFV	Q71UI9	128 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CHST9	Q7L1S5	443 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	SYT13	Q7L8C5	426 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	TRMT11	Q7Z4G4	463 aa	Known RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ANKS1B	Q7Z6G8	1248 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PHLDB2	Q86SQ0	1253 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CHSY1	Q86X52	802 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	FAM131B	Q86XD5	332 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ZNF683	Q8IZ20	524 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CAMKK1	Q8N5S9	505 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	WFIKKN2	Q8TEU8	576 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	USP33	Q8TEY7	942 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	FAM172A	Q8WUF8	416 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ZNF653	Q96CK0	615 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	LMLN	Q96KR4	655 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	TRIM55	Q9BYV6	548 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	THAP2	Q9H0W7	228 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ANLN	Q9NQW6	1124 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PRMT8	Q9NR22	394 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ELOVL2	Q9NXB9	296 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PLK2	Q9NYY3	685 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	COX16	Q9P0S2	106 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	OR12D3	Q9UGF7	316 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	XPO7	Q9UIA9	1087 aa	Known RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	FBXO4	Q9UKT5	387 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	TBC1D30	Q9Y2I9	924 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	HS3ST4	Q9Y661	456 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	COL4A2	P08572	1712 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	GOLGA6L7	A0A1B0GV03	622 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	OR14I1	A6ND48	311 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	GOLGA6L6	A8MZA4	724 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PRRT4	C9JH25	899 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	MYO1F	O00160	1098 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CCP110	O43303	1012 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	TBX1	O43435	398 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	LAMTOR5	O43504	91 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	TBL1X	O60907	577 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	LRCH4	O75427	683 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	RNF8	O76064	485 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	MTA2	O94776	668 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	LUC7L3	O95232	432 aa	Known RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PNLIP	P16233	465 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PSMA2	P25787	234 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	HOXC13	P31276	330 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	L1CAM	P32004	1257 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ARL4A	P40617	200 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CXCL12	P48061	93 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	SGSH	P51688	502 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	PLK1	P53350	603 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ATXN1	P54253	815 aa	Known RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	HADHB	P55084	474 aa	Known RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CDH4	P55283	916 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	GSDMD	P57764	484 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	OGDH	Q02218	1023 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CDH18	Q13634	790 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CDO1	Q16878	200 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	BOLA3	Q53S33	107 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	MANEAL	Q5VSG8	457 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	RAP1GAP2	Q684P5	730 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	GTF2IRD2B	Q6EKJ0	949 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ZNF783	Q6ZMS7	281 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889		Q6ZS52	159 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	SLFN11	Q7Z7L1	901 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	SETD3	Q86TU7	594 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	GTF2IRD2	Q86UP8	949 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	ADIPOR2	Q86V24	386 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	MFN1	Q8IWA4	741 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	RHOT2	Q8IXI1	618 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	LGI2	Q8N0V4	545 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	AHI1	Q8N157	1196 aa		4.8	□□□□□ -1.64
ATXN2-222	ENST00000550889	CCAR2	Q8N163	923 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms