RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 LRRC73Q5JTD7 316 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 MANEALQ5VSG8 457 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 KYAT3Q6YP21 454 aaKnown RBP13.6□□□□□ -0.23
NUP188-211ENST00000550219 KDM7AQ6ZMT4 941 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 Q6ZSR6 202 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 CYP4V2Q6ZWL3 525 aaPredicted RBP13.6□□□□□ -0.23
NUP188-211ENST00000550219 DAAM2Q86T65 1068 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 SYCE1Q8N0S2 351 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 TRIM58Q8NG06 486 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 OR4C6Q8NH72 309 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 ARHGEF2Q92974 986 aaKnown RBP13.6□□□□□ -0.23
NUP188-211ENST00000550219 NTAN1Q96AB6 310 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 SLC17A9Q9BYT1 436 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 TMEM248Q9NWD8 314 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 HPCAL4Q9UM19 191 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 CLCA2Q9UQC9 943 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 FADS3Q9Y5Q0 445 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 CABIN1Q9Y6J0 2220 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 KNL1Q8NG31 2342 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 POM121BA6NF01 834 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 TMEM110-MUSTN1A8MSY1 372 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 KIF5CO60282 957 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 NEBLO76041 1014 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 CD160O95971 181 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 IL1R2P27930 398 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 GEMIN4P57678 1058 aaKnown RBP13.59□□□□□ -0.23
NUP188-211ENST00000550219 SLC25A11Q02978 314 aaKnown RBP13.59□□□□□ -0.23
NUP188-211ENST00000550219 ATXN7L2Q5T6C5 722 aaPredicted RBP13.59□□□□□ -0.23
NUP188-211ENST00000550219 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 SCYL2Q6P3W7 929 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 ABI3BPQ7Z7G0 1075 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 NT5DC3Q86UY8 548 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 NLRP14Q86W24 1093 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 NETO2Q8NC67 525 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 FEM1CQ96JP0 617 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 GOLPH3Q9H4A6 298 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 IPO11Q9UI26 975 aaKnown RBP13.59□□□□□ -0.23
NUP188-211ENST00000550219 NEU3Q9UQ49 428 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 DOCK4Q8N1I0 1966 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 CACNA1GO43497 2377 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 DOCK9Q9BZ29 2069 aa13.59□□□□□ -0.23
NUP188-211ENST00000550219 DMXL2Q8TDJ6 3036 aa13.58□□□□□ -0.23
NUP188-211ENST00000550219 A0A087WV48 116 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 IGLON5A6NGN9 336 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 C16orf96A6NNT2 1141 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 H3BM21 787 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 TLX3O43711 291 aaPredicted RBP13.58□□□□□ -0.24
NUP188-211ENST00000550219 TMCC1O94876 653 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 TCF4P15884 667 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 ITPKBP27987 946 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 AIF1P55008 147 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 TAS2R40P59535 323 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.24
NUP188-211ENST00000550219 NRG1Q02297 640 aaPredicted RBP13.58□□□□□ -0.24
NUP188-211ENST00000550219 SGCGQ13326 291 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 PDE1CQ14123 709 aaPredicted RBP13.58□□□□□ -0.24
NUP188-211ENST00000550219 BOLA3Q53S33 107 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 EFHC2Q5JST6 749 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 LRRC69Q6ZNQ3 347 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 POLNQ7Z5Q5 900 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 PARGQ86W56 976 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 PSTKQ8IV42 348 aaKnown RBP13.58□□□□□ -0.24
NUP188-211ENST00000550219 PYROXD2Q8N2H3 581 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 BMFQ96LC9 184 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 APOLD1Q96LR9 279 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 KLHL32Q96NJ5 620 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 ALS2CR12Q96Q35 445 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 PEBP4Q96S96 227 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 OSBPL2Q9H1P3 480 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 MAGEH1Q9H213 219 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 HYOU1Q9Y4L1 999 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 ZFYVE26Q68DK2 2539 aa13.58□□□□□ -0.24
NUP188-211ENST00000550219 FPGTO14772 594 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 PSTPIP1O43586 416 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 AP1G1O43747 822 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 SPOPO43791 374 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 CREB3O43889 395 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 PRPSAP2O60256 369 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 BRINP1O60477 761 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 GSRP00390 522 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 MT-CO3P00414 261 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 CTNNA2P26232 953 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 EPHB2P29323 1055 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 RABIFP47224 123 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 HNRNPKP61978 463 aaKnown RBP eCLIP13.57□□□□□ -0.24
NUP188-211ENST00000550219 FZD2Q14332 565 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 HADHQ16836 314 aaKnown RBP13.57□□□□□ -0.24
NUP188-211ENST00000550219 SOWAHCQ53LP3 525 aaPredicted RBP13.57□□□□□ -0.24
NUP188-211ENST00000550219 ZNF805Q5CZA5 627 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 ZNF569Q5MCW4 686 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 TXNRD3NBQ6F5E7 133 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 ZNF548Q8NEK5 533 aaPredicted RBP13.57□□□□□ -0.24
NUP188-211ENST00000550219 TEKT4Q8WW24 435 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 ISG20Q96AZ6 181 aaKnown RBP13.57□□□□□ -0.24
NUP188-211ENST00000550219 HES6Q96HZ4 224 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 EXOC2Q96KP1 924 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 GDAP1L1Q96MZ0 367 aa13.57□□□□□ -0.24
NUP188-211ENST00000550219 NRSN2Q9GZP1 204 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms