RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CCDC157Q569K6 752 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 ODF2Q5BJF6 829 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 MARC1Q5VT66 337 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 RAD9BQ6WBX8 426 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 Q6ZSR6 202 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 ACRBPQ8NEB7 543 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.92■□□□□ 0.14
DDX54-205ENST00000548786 FAF2Q96CS3 445 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 TUBGCP5Q96RT8 1024 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 NOD2Q9HC29 1040 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 PCDHGC4Q9Y5F7 938 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 HEY1Q9Y5J3 304 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 EPN1Q9Y6I3 576 aaPredicted RBP15.92■□□□□ 0.14
DDX54-205ENST00000548786 CABIN1Q9Y6J0 2220 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 RCCD1A6NED2 376 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 C3orf70A6NLC5 250 aaPredicted RBP15.91■□□□□ 0.14
DDX54-205ENST00000548786 A6NNZ2 444 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 FLRT2O43155 660 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 NDUFA10O95299 355 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 LCA5LO95447 670 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 ITGAVP06756 1048 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 CSNK1DP48730 415 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 ARRB1P49407 418 aaPredicted RBP15.91■□□□□ 0.14
DDX54-205ENST00000548786 GALNT2Q10471 571 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 SLC10A2Q12908 348 aaPredicted RBP15.91■□□□□ 0.14
DDX54-205ENST00000548786 GRM3Q14832 879 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 SUZ12Q15022 739 aaKnown RBP15.91■□□□□ 0.14
DDX54-205ENST00000548786 ZNF542PQ5EBM4 170 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 ERAP2Q6P179 960 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 NPNTQ6UXI9 565 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 B4GALNT4Q76KP1 1039 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 IQCHQ86VS3 1027 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 RFX6Q8HWS3 928 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 TMTC1Q8IUR5 882 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 RHOT1Q8IXI2 618 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 SLC22A18ASQ8N1D0 253 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 BBS5Q8N3I7 341 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 PNPLA1Q8N8W4 532 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 CCNYQ8ND76 341 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 BMFQ96LC9 184 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 ZNF641Q96N77 438 aaPredicted RBP15.91■□□□□ 0.14
DDX54-205ENST00000548786 RNF157Q96PX1 679 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 ANP32EQ9BTT0 268 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 C1QTNF2Q9BXJ5 285 aa15.91■□□□□ 0.14
DDX54-205ENST00000548786 CHD8Q9HCK8 2581 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 TSPAN11A1L157 253 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 FPGTO14772 594 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 MAGEC1O60732 1142 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 CBFA2T3O75081 653 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 NEBLO76041 1014 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 TM7SF2O76062 418 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 IPO7O95373 1038 aaKnown RBP15.9■□□□□ 0.14
DDX54-205ENST00000548786 C6P13671 934 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 EPHA8P29322 1005 aaPredicted RBP15.9■□□□□ 0.14
DDX54-205ENST00000548786 SLC1A1P43005 524 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 MARCKSL1P49006 195 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 LIG3P49916 1009 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 NAP1L1P55209 391 aaKnown RBP15.9■□□□□ 0.14
DDX54-205ENST00000548786 AP1S1P61966 158 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 NSUN2Q08J23 767 aaKnown RBP eCLIP15.9■□□□□ 0.14
DDX54-205ENST00000548786 ELP6Q0PNE2 266 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 TPRG1LQ5T0D9 272 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 BRAT1Q6PJG6 821 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 PLD5Q8N7P1 536 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 LGMNQ99538 433 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 KLF6Q99612 283 aaPredicted RBP15.9■□□□□ 0.14
DDX54-205ENST00000548786 BAG1Q99933 345 aaPredicted RBP15.9■□□□□ 0.14
DDX54-205ENST00000548786 MGME1Q9BQP7 344 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 MAK16Q9BXY0 300 aaKnown RBP15.9■□□□□ 0.14
DDX54-205ENST00000548786 LUC7LQ9NQ29 371 aaKnown RBP15.9■□□□□ 0.14
DDX54-205ENST00000548786 DTLQ9NZJ0 730 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 SALL4Q9UJQ4 1053 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 ATP8A1Q9Y2Q0 1164 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 REXO2Q9Y3B8 237 aaKnown RBP15.9■□□□□ 0.14
DDX54-205ENST00000548786 PCDHGB2Q9Y5G2 931 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 ALG6Q9Y672 507 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 DUSP10Q9Y6W6 482 aa15.9■□□□□ 0.14
DDX54-205ENST00000548786 TRAFD1O14545 582 aaPredicted RBP15.89■□□□□ 0.13
DDX54-205ENST00000548786 RIOK3O14730 519 aaKnown RBP15.89■□□□□ 0.13
DDX54-205ENST00000548786 APOL1O14791 398 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 PCDHGA12O60330 932 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 DFNA5O60443 496 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 PMLP29590 882 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 IGFALSP35858 605 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 HSPA9P38646 679 aaKnown RBP15.89■□□□□ 0.13
DDX54-205ENST00000548786 MMP12P39900 470 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 GRK6P43250 576 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 DSC2Q02487 901 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 OVGP1Q12889 678 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 TRAF2Q12933 501 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 PDE1CQ14123 709 aaPredicted RBP15.89■□□□□ 0.13
DDX54-205ENST00000548786 TCEAL1Q15170 157 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 PTPRRQ15256 657 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 IFI16Q16666 785 aaKnown RBP15.89■□□□□ 0.13
DDX54-205ENST00000548786 TMEM52BQ4KMG9 183 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 KAZNQ674X7 775 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 MFSD7Q6UXD7 560 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 ABI3BPQ7Z7G0 1075 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 DAAM2Q86T65 1068 aa15.89■□□□□ 0.13
DDX54-205ENST00000548786 EID2Q8N6I1 236 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms