RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 NPWQ8N729 165 aa13.48□□□□□ -0.25
CPSF6-204ENST00000547486 TSEN2Q8NCE0 465 aaKnown RBP13.48□□□□□ -0.25
CPSF6-204ENST00000547486 HCAR2Q8TDS4 363 aa13.48□□□□□ -0.25
CPSF6-204ENST00000547486 NSMCE3Q96MG7 304 aa13.48□□□□□ -0.25
CPSF6-204ENST00000547486 FUCA2Q9BTY2 467 aa13.48□□□□□ -0.25
CPSF6-204ENST00000547486 PCDH12Q9NPG4 1184 aa13.48□□□□□ -0.25
CPSF6-204ENST00000547486 CNOT8Q9UFF9 292 aaKnown RBP13.48□□□□□ -0.25
CPSF6-204ENST00000547486 ACACAQ13085 2346 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 TSPAN11A1L157 253 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 H3BM21 787 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 CASC3O15234 703 aaKnown RBP13.47□□□□□ -0.25
CPSF6-204ENST00000547486 BRINP1O60477 761 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 PRKCGP05129 697 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 GP1BAP07359 652 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 TCF4P15884 667 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 ADKP55263 362 aaKnown RBP13.47□□□□□ -0.25
CPSF6-204ENST00000547486 YPEL5P62699 121 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 KLHL30Q0D2K2 578 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 IRF4Q15306 451 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 CDKN3Q16667 212 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 PRRT3Q5FWE3 981 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 PPP6R3Q5H9R7 873 aaPredicted RBP13.47□□□□□ -0.25
CPSF6-204ENST00000547486 ZCCHC8Q6NZY4 707 aaKnown RBP13.47□□□□□ -0.25
CPSF6-204ENST00000547486 GUSBP11Q6P575 273 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 IFI44Q8TCB0 444 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 FNIP1Q8TF40 1166 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 ZNF641Q96N77 438 aaPredicted RBP13.47□□□□□ -0.25
CPSF6-204ENST00000547486 NCAPGQ9BPX3 1015 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 DUSP23Q9BVJ7 150 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 CLPBQ9H078 707 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 CWC15Q9P013 229 aaKnown RBP13.47□□□□□ -0.25
CPSF6-204ENST00000547486 SALL4Q9UJQ4 1053 aa13.47□□□□□ -0.25
CPSF6-204ENST00000547486 CPED1A4D0V7 1026 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 ARHGAP42A6NI28 874 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 EIF3CLB5ME19 914 aaKnown RBP13.46□□□□□ -0.25
CPSF6-204ENST00000547486 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
CPSF6-204ENST00000547486 TPP1O14773 563 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 MUSKO15146 869 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 YY2O15391 372 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 DAPK3O43293 454 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 PRPSAP2O60256 369 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 LRCH4O75427 683 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 PALMO75781 387 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 RNF8O76064 485 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 CELA2BP08218 269 aaPredicted RBP13.46□□□□□ -0.25
CPSF6-204ENST00000547486 C6P13671 934 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 DESP17661 470 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 TGM2P21980 687 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 XPAP23025 273 aaPredicted RBP13.46□□□□□ -0.25
CPSF6-204ENST00000547486 IL1R2P27930 398 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 CSNK1DP48730 415 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 HCAR3P49019 387 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 LIG3P49916 1009 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 DUSP3P51452 185 aaPredicted RBP13.46□□□□□ -0.25
CPSF6-204ENST00000547486 SUOXP51687 545 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 THOP1P52888 689 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 COL9A2Q14055 689 aaPredicted RBP13.46□□□□□ -0.25
CPSF6-204ENST00000547486 DPYSQ14117 519 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 PTK2BQ14289 1009 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 LRRC14Q15048 493 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 FAXCQ5TGI0 409 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 SRLQ86TD4 932 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 PHACTR4Q8IZ21 702 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 BTN2A2Q8WVV5 523 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 ZNF653Q96CK0 615 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 BBC3Q96PG8 261 aaPredicted RBP13.46□□□□□ -0.25
CPSF6-204ENST00000547486 EIF3CQ99613 913 aaKnown RBP13.46□□□□□ -0.25
CPSF6-204ENST00000547486 LRRC61Q9BV99 259 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 ABCG4Q9H172 646 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 ISCUQ9H1K1 167 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 USP29Q9HBJ7 922 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 DONSONQ9NYP3 566 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 MYO1AQ9UBC5 1043 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 SPASTQ9UBP0 616 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 RAI2Q9Y5P3 530 aa13.46□□□□□ -0.25
CPSF6-204ENST00000547486 TDRD6O60522 2096 aaKnown RBP13.45□□□□□ -0.26
CPSF6-204ENST00000547486 TTC24A2A3L6 582 aaPredicted RBP13.45□□□□□ -0.26
CPSF6-204ENST00000547486 EME2A4GXA9 379 aaPredicted RBP13.45□□□□□ -0.26
CPSF6-204ENST00000547486 DFFAO00273 331 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 SERPINC1P01008 464 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 MPOP05164 745 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 TSHRP16473 764 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 ELP6Q0PNE2 266 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 INPP5AQ14642 412 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 GRM3Q14832 879 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 HGSNATQ68CP4 663 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 KCTD16Q68DU8 428 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 CRTC1Q6UUV9 634 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 MACC1Q6ZN28 852 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 EFL1Q7Z2Z2 1120 aaKnown RBP13.45□□□□□ -0.26
CPSF6-204ENST00000547486 PSTKQ8IV42 348 aaKnown RBP13.45□□□□□ -0.26
CPSF6-204ENST00000547486 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 MAPK15Q8TD08 544 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 FGF11Q92914 225 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 TSACCQ96A04 125 aaPredicted RBP13.45□□□□□ -0.26
CPSF6-204ENST00000547486 TUBGCP5Q96RT8 1024 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 IL12RB2Q99665 862 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 BOCQ9BWV1 1114 aa13.45□□□□□ -0.26
CPSF6-204ENST00000547486 C1QTNF7Q9BXJ2 289 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms