RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 KCNK3O14649 394 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 RIOK3O14730 519 aaKnown RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 SPINT1O43278 529 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 KIF5CO60282 957 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 GJB3O75712 270 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 FSBPO95073 299 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 RBP3P10745 1247 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 CA4P22748 312 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 NFKBIAP25963 317 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 ABL2P42684 1182 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 EIF3EP60228 445 aaKnown RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 RPL26P61254 145 aaKnown RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 RACK1P63244 317 aaKnown RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 NIPAL4Q0D2K0 466 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 CFAP58Q5T655 872 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 SLC13A5Q86YT5 568 aaPredicted RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 CDKL3Q8IVW4 592 aaPredicted RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 RGL4Q8IZJ4 473 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 IMP4Q96G21 291 aaKnown RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 C1QTNF2Q9BXJ5 285 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 SLC25A51Q9H1U9 297 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 EBF2Q9HAK2 575 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 TRMT1Q9NXH9 659 aaKnown RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 EIF2B4Q9UI10 523 aaKnown RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 PHTF1Q9UMS5 762 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 RPL26L1Q9UNX3 145 aaKnown RBP14.59□□□□□ -0.07
DDX54-203ENST00000546869 PCDHGC4Q9Y5F7 938 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 SPAG17Q6Q759 2223 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 A0A1W2PQU0 124 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 TTC24A2A3L6 582 aaPredicted RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 H7C0C1 242 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 KHNYNO15037 678 aaKnown RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 BCAT2O15382 392 aaPredicted RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 PCDH8O95206 1070 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 PGLSO95336 258 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 MMP2P08253 660 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 XPAP23025 273 aaPredicted RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 MAOBP27338 520 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 RBL1P28749 1068 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 HOXD11P31277 338 aaPredicted RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 ATP5OP48047 213 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 PPP2CBP62714 309 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 PPP2CAP67775 309 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 SKOR1P84550 965 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 DSC2Q02487 901 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 SPEM2Q0P670 501 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 TRAF2Q12933 501 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 IHHQ14623 411 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 AGERQ15109 404 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 ZNF284Q2VY69 593 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 SETMARQ53H47 684 aaPredicted RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 ZNF569Q5MCW4 686 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 ARMC12Q5T9G4 340 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 ERAP2Q6P179 960 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 ALYREFQ86V81 257 aaKnown RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 ZSWIM9Q86XI8 627 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 NDUFAF2Q8N183 169 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 DCLK2Q8N568 766 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 SLC35B2Q8TB61 432 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 FAM174AQ8TBP5 190 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 PIH1D2Q8WWB5 315 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 MAIP1Q8WWC4 291 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 SCRN2Q96FV2 425 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 PBKQ96KB5 322 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 LENG8Q96PV6 779 aaPredicted RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 TDRD1Q9BXT4 1180 aaKnown RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 USP29Q9HBJ7 922 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 GLOD4Q9HC38 313 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 CAPN10Q9HC96 672 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 PARD6AQ9NPB6 346 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 TTC7AQ9ULT0 858 aaPredicted RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 PYCARDQ9ULZ3 195 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 SLC6A14Q9UN76 642 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 ZFR2Q9UPR6 939 aaKnown RBP14.58□□□□□ -0.08
DDX54-203ENST00000546869 ZKSCAN5Q9Y2L8 839 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 RAI2Q9Y5P3 530 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 THADAQ6YHU6 1953 aa14.58□□□□□ -0.08
DDX54-203ENST00000546869 PRLP01236 227 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 STIP1P31948 543 aaKnown RBP14.57□□□□□ -0.08
DDX54-203ENST00000546869 CD68P34810 354 aaPredicted RBP14.57□□□□□ -0.08
DDX54-203ENST00000546869 MMP12P39900 470 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 GRIA4P48058 902 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 AFF3P51826 1226 aaKnown RBP14.57□□□□□ -0.08
DDX54-203ENST00000546869 NAPEPLDQ6IQ20 393 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 DARS2Q6PI48 645 aaKnown RBP14.57□□□□□ -0.08
DDX54-203ENST00000546869 RAVER1Q8IY67 606 aaKnown RBP14.57□□□□□ -0.08
DDX54-203ENST00000546869 ZNF567Q8N184 647 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 CBARPQ8N350 705 aaPredicted RBP14.57□□□□□ -0.08
DDX54-203ENST00000546869 RASGEF1CQ8N431 466 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 AGAP3Q96P47 875 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 FCRL5Q96RD9 977 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 MCCC1Q96RQ3 725 aaPredicted RBP14.57□□□□□ -0.08
DDX54-203ENST00000546869 SLC17A9Q9BYT1 436 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 PCDH12Q9NPG4 1184 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 SEPT10Q9P0V9 454 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 PCDHB9Q9Y5E1 797 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 HS3ST3A1Q9Y663 406 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.57□□□□□ -0.08
DDX54-203ENST00000546869 PIEZO1Q92508 2521 aa14.57□□□□□ -0.08
DDX54-203ENST00000546869 TCRBV7S2A1N4TA0A589 114 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms