RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 NSMCE3Q96MG7 304 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 FAM118BQ9BPY3 351 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 PARD6AQ9NPB6 346 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 PYCARDQ9ULZ3 195 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 RAI2Q9Y5P3 530 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 PLXND1Q9Y4D7 1925 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 THADAQ6YHU6 1953 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 SDK1Q7Z5N4 2213 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 A0A1B0GTW7 788 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 A0A1W2PPC4 97 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 A0A1W2PQ67 120 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 TSPAN11A1L157 253 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 UPK3BL1B0FP48 263 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 PRR5-ARHGAP8B1AHC4 643 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 UPK3BL2E5RIL1 263 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 BCAT2O15382 392 aaPredicted RBP16.96■□□□□ 0.31
LTBR-215ENST00000546296 SERPINF2P08697 491 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 ITIH2P19823 946 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 CA4P22748 312 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 PTPN3P26045 913 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 RPS21P63220 83 aaKnown RBP16.96■□□□□ 0.31
LTBR-215ENST00000546296 FAM193AP78312 1265 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 NIPAL4Q0D2K0 466 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 ELP6Q0PNE2 266 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 SF3A2Q15428 464 aaKnown RBP16.96■□□□□ 0.31
LTBR-215ENST00000546296 SETMARQ53H47 684 aaPredicted RBP16.96■□□□□ 0.31
LTBR-215ENST00000546296 TRIM61Q5EBN2 209 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 FAM182AQ5T1J6 154 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 ARMC12Q5T9G4 340 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 KIAA2013Q8IYS2 634 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 CNTD1Q8N815 330 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 CXorf40AQ8TE69 158 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 TLR10Q9BXR5 811 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 NUSAP1Q9BXS6 441 aaKnown RBP16.96■□□□□ 0.31
LTBR-215ENST00000546296 CARD9Q9H257 536 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 C10orf88Q9H8K7 445 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 PCDH12Q9NPG4 1184 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 KLHL8Q9P2G9 620 aaPredicted RBP16.96■□□□□ 0.31
LTBR-215ENST00000546296 ITM2BQ9Y287 266 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 JRKLQ9Y4A0 524 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 PCDHB9Q9Y5E1 797 aa16.96■□□□□ 0.31
LTBR-215ENST00000546296 PATE3B3GLJ2 98 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 TRAFD1O14545 582 aaPredicted RBP16.95■□□□□ 0.3
LTBR-215ENST00000546296 ENC1O14682 589 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 AREL1O15033 823 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 SLC31A1O15431 190 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 HTRA2O43464 458 aaPredicted RBP16.95■□□□□ 0.3
LTBR-215ENST00000546296 FOXD2O60548 495 aaPredicted RBP16.95■□□□□ 0.3
LTBR-215ENST00000546296 STK10O94804 968 aaKnown RBP16.95■□□□□ 0.3
LTBR-215ENST00000546296 CPP00450 1065 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 PRKCGP05129 697 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 RBP3P10745 1247 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 NFKBIAP25963 317 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 RBL1P28749 1068 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 NUDT1P36639 197 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 CD86P42081 329 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 WASHC5Q12768 1159 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 TRAF2Q12933 501 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 SGCGQ13326 291 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 PEAR1Q5VY43 1037 aaPredicted RBP16.95■□□□□ 0.3
LTBR-215ENST00000546296 SEL1L3Q68CR1 1132 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 ALG1LQ6GMV1 187 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 KIAA1161Q6NSJ0 714 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 PID1Q7Z2X4 250 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 ADAT2Q7Z6V5 191 aaKnown RBP16.95■□□□□ 0.3
LTBR-215ENST00000546296 ZSWIM9Q86XI8 627 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 SLC13A5Q86YT5 568 aaPredicted RBP16.95■□□□□ 0.3
LTBR-215ENST00000546296 NDUFAF2Q8N183 169 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 ARRDC2Q8TBH0 407 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 ECHDC3Q96DC8 303 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 SERAC1Q96JX3 654 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 TEKT5Q96M29 485 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 VAT1Q99536 393 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 WRAP53Q9BUR4 548 aaKnown RBP16.95■□□□□ 0.3
LTBR-215ENST00000546296 GLOD4Q9HC38 313 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 TM9SF3Q9HD45 589 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 AASDHPPTQ9NRN7 309 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 GGT7Q9UJ14 662 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 SLC6A14Q9UN76 642 aa16.95■□□□□ 0.3
LTBR-215ENST00000546296 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.95■□□□□ 0.3
LTBR-215ENST00000546296 TCRBV7S2A1N4TA0A589 114 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 IGLON5A6NGN9 336 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 RIOK3O14730 519 aaKnown RBP16.94■□□□□ 0.3
LTBR-215ENST00000546296 LATO43561 262 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 CEP104O60308 925 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 MMP20O60882 483 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 PGLSO95336 258 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 PRLRP16471 622 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 TGM1P22735 817 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 CXCR5P32302 372 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 AFF3P51826 1226 aaKnown RBP16.94■□□□□ 0.3
LTBR-215ENST00000546296 EPHB1P54762 984 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 SEMG2Q02383 582 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 KLF1Q13351 362 aaPredicted RBP16.94■□□□□ 0.3
LTBR-215ENST00000546296 TEAD4Q15561 434 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 ZNF284Q2VY69 593 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 AASDHQ4L235 1098 aaPredicted RBP16.94■□□□□ 0.3
LTBR-215ENST00000546296 TCEAL6Q6IPX3 200 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 SLC23A3Q6PIS1 610 aa16.94■□□□□ 0.3
LTBR-215ENST00000546296 PRR23CQ6ZRP0 262 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms