RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.57	□□□□□ -1.36	1e-6	■■■□□ 17.5
TAF1D-222	ENST00000546088	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	NIPA2	Q8N8Q9	360 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	ATP11C	Q8NB49	1132 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	KCTD6	Q8NC69	237 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	WFIKKN2	Q8TEU8	576 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	ARHGEF2	Q92974	986 aa	Known RBP	6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	EXOC2	Q96KP1	924 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	CSPG4P5	Q96PW8	444 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	TM6SF2	Q9BZW4	377 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	SLC39A8	Q9C0K1	460 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	MKRN2	Q9H000	416 aa	Known RBP	6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	NOL6	Q9H6R4	1146 aa	Known RBP	6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	PCDH18	Q9HCL0	1135 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	LZTFL1	Q9NQ48	299 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	PRMT8	Q9NR22	394 aa	Predicted RBP	6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	TMEM248	Q9NWD8	314 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	PPARGC1A	Q9UBK2	798 aa	Known RBP	6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	SEPT3	Q9UH03	358 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	SLC25A13	Q9UJS0	675 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	GUCA1B	Q9UMX6	200 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	CYP8B1	Q9UNU6	501 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	TBC1D30	Q9Y2I9	924 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	ALG6	Q9Y672	507 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	SHROOM3	Q8TF72	1996 aa		6.57	□□□□□ -1.36
TAF1D-222	ENST00000546088	RASA4B	C9J798	803 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088		J3KR12	359 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	RNF103	O00237	685 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	RASA4	O43374	803 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	APBB3	O95704	486 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	FTCD	O95954	541 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	KRT1	P04264	644 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	SRC	P12931	536 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	TDGF1	P13385	188 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	BCKDHB	P21953	392 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	ARL4A	P40617	200 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	MAGEA9	P43362	315 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	PAPOLA	P51003	745 aa	Known RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	KRT83	P78385	493 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	MTA1	Q13330	715 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	DPYSL3	Q14195	570 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	STARD3	Q14849	445 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	ACAP1	Q15027	740 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	EIF4H	Q15056	248 aa	Known RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	DLG2	Q15700	870 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	CCDC6	Q16204	474 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	BOLA3	Q53S33	107 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	AADACL2	Q6P093	401 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	NPNT	Q6UXI9	565 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	ARMCX6	Q7L4S7	300 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	TRMT11	Q7Z4G4	463 aa	Known RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	SETD3	Q86TU7	594 aa	Predicted RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	TMPRSS6	Q8IU80	811 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	MMAA	Q8IVH4	418 aa	Known RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	STK40	Q8N2I9	435 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	RYBP	Q8N488	228 aa	Predicted RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	RTL3	Q8N8U3	475 aa	Known RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	ANP32B	Q92688	251 aa	Known RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	KRT35	Q92764	455 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	PTPRN2	Q92932	1015 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	TTC17	Q96AE7	1141 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	MRGPRX1	Q96LB2	322 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	GABRG3	Q99928	467 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	TMEM245	Q9H330	911 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	CATSPERB	Q9H7T0	1116 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	LUC7L	Q9NQ29	371 aa	Known RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	PRSS16	Q9NQE7	514 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	INTU	Q9ULD6	942 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	CAPN6	Q9Y6Q1	641 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	ABCA7	Q8IZY2	2146 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	ILVBL	A1L0T0	632 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	GRID2IP	A4D2P6	1211 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	PRR23A	A6NEV1	266 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	FAM47DP	A6NHR8	397 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	TIMM44	O43615	452 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	GJB3	O75712	270 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	PALM	O75781	387 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	MTA2	O94776	668 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	CD160	O95971	181 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	KRT10	P13645	584 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	KDELR1	P24390	212 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	IL4R	P24394	825 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	PLA2G5	P39877	138 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	NNMT	P40261	264 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	PSMD8	P48556	350 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	COPA	P53621	1224 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	AIF1	P55008	147 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	NHLH1	Q02575	133 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	KIF5A	Q12840	1032 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	DPYS	Q14117	519 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	DPYSL2	Q16555	572 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	ODF2	Q5BJF6	829 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	CEP68	Q76N32	757 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	CCNJL	Q8IV13	435 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	CCDC50	Q8IVM0	306 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	SH2D3C	Q8N5H7	860 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	CHST14	Q8NCH0	376 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	PCDH19	Q8TAB3	1148 aa		6.56	□□□□□ -1.36
TAF1D-222	ENST00000546088	GRIN3A	Q8TCU5	1115 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms