RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 OLFM3Q96PB7 478 aa17.65■□□□□ 0.42
CD9-211ENST00000546073 NAP1L3Q99457 506 aaPredicted RBP17.65■□□□□ 0.42
CD9-211ENST00000546073 ZDHHC5Q9C0B5 715 aa17.65■□□□□ 0.42
CD9-211ENST00000546073 NOD2Q9HC29 1040 aa17.65■□□□□ 0.42
CD9-211ENST00000546073 GOLGA6AQ9NYA3 693 aa17.65■□□□□ 0.42
CD9-211ENST00000546073 SAE1Q9UBE0 346 aaPredicted RBP17.65■□□□□ 0.42
CD9-211ENST00000546073 DNPEPQ9ULA0 475 aa17.65■□□□□ 0.42
CD9-211ENST00000546073 PHTF1Q9UMS5 762 aa17.65■□□□□ 0.42
CD9-211ENST00000546073 FADS3Q9Y5Q0 445 aa17.65■□□□□ 0.42
CD9-211ENST00000546073 MUC22E2RYF6 1773 aaPredicted RBP17.64■□□□□ 0.41
CD9-211ENST00000546073 CACNA1HO95180 2353 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 PRAMEF26H0Y7S4 382 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 DDX3YO15523 660 aaKnown RBP17.64■□□□□ 0.41
CD9-211ENST00000546073 LZTS3O60299 673 aaPredicted RBP17.64■□□□□ 0.41
CD9-211ENST00000546073 PEX11BO96011 259 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 RBP3P10745 1247 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 RACK1P63244 317 aaKnown RBP17.64■□□□□ 0.41
CD9-211ENST00000546073 ARHGAP8P85298 464 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 OTUD4Q01804 1114 aaKnown RBP17.64■□□□□ 0.41
CD9-211ENST00000546073 ARHGEF7Q14155 803 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 NOMO1Q15155 1222 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 IL27RAQ6UWB1 636 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 USP45Q70EL2 814 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 ZCCHC9Q8N567 271 aaKnown RBP17.64■□□□□ 0.41
CD9-211ENST00000546073 ACTL9Q8TC94 416 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 TRIM44Q96DX7 344 aaPredicted RBP17.64■□□□□ 0.41
CD9-211ENST00000546073 IL12RB2Q99665 862 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 PCDHB9Q9Y5E1 797 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 PCDHGC4Q9Y5F7 938 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 RAI2Q9Y5P3 530 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 ATXN2Q99700 1313 aaKnown RBP17.64■□□□□ 0.41
CD9-211ENST00000546073 CKAP5Q14008 2032 aa17.64■□□□□ 0.41
CD9-211ENST00000546073 CFAP69A5D8W1 941 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 CEP104O60308 925 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 TM7SF2O76062 418 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 PECAM1P16284 738 aaPredicted RBP17.63■□□□□ 0.41
CD9-211ENST00000546073 RGRP47804 291 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 METAP1P53582 386 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 NAPEPLDQ6IQ20 393 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 KIAA2013Q8IYS2 634 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 DCLK2Q8N568 766 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 FAM131CQ96AQ9 280 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 QKIQ96PU8 341 aaKnown RBP eCLIP17.63■□□□□ 0.41
CD9-211ENST00000546073 HOMER3Q9NSC5 361 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 KCTD5Q9NXV2 234 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 ATP8A1Q9Y2Q0 1164 aa17.63■□□□□ 0.41
CD9-211ENST00000546073 MUSKO15146 869 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 SLC31A1O15431 190 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 HLA-DQB2P05538 268 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 TIMP2P16035 220 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 HNRNPA2B1P22626 353 aaKnown RBP17.62■□□□□ 0.41
CD9-211ENST00000546073 CD38P28907 300 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 RPL26P61254 145 aaKnown RBP17.62■□□□□ 0.41
CD9-211ENST00000546073 DSC2Q02487 901 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 PRKD1Q15139 912 aaPredicted RBP17.62■□□□□ 0.41
CD9-211ENST00000546073 CCDC6Q16204 474 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 SLC23A3Q6PIS1 610 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 PRR23CQ6ZRP0 262 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 RMDN1Q96DB5 314 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 PBKQ96KB5 322 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 SRPK1Q96SB4 655 aaKnown RBP17.62■□□□□ 0.41
CD9-211ENST00000546073 GTPBP2Q9BX10 602 aaKnown RBP17.62■□□□□ 0.41
CD9-211ENST00000546073 SLC17A9Q9BYT1 436 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 SLC25A51Q9H1U9 297 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 KCNF1Q9H3M0 494 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 RSPH14Q9UHP6 348 aa17.62■□□□□ 0.41
CD9-211ENST00000546073 RPL26L1Q9UNX3 145 aaKnown RBP17.62■□□□□ 0.41
CD9-211ENST00000546073 TSPAN11A1L157 253 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 RNF103O00237 685 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 FPGTO14772 594 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 KCNN4O15554 427 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 ANXA9O76027 345 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 ELFN1P0C7U0 828 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 CR2P20023 1033 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 CD86P42081 329 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 OVGP1Q12889 678 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 LONRF2Q1L5Z9 754 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 PLA2G2CQ5R387 149 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 PGBD5Q8N414 524 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 LRRN4Q8WUT4 740 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 TEKT5Q96M29 485 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 WRAP53Q9BUR4 548 aaKnown RBP17.61■□□□□ 0.41
CD9-211ENST00000546073 GLOD4Q9HC38 313 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 PCDH9Q9HC56 1237 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 PCDH12Q9NPG4 1184 aa17.61■□□□□ 0.41
CD9-211ENST00000546073 TTC24A2A3L6 582 aaPredicted RBP17.6■□□□□ 0.41
CD9-211ENST00000546073 RIOK3O14730 519 aaKnown RBP17.6■□□□□ 0.41
CD9-211ENST00000546073 HTRA2O43464 458 aaPredicted RBP17.6■□□□□ 0.41
CD9-211ENST00000546073 LATO43561 262 aa17.6■□□□□ 0.41
CD9-211ENST00000546073 DFNA5O60443 496 aa17.6■□□□□ 0.41
CD9-211ENST00000546073 PGLSO95336 258 aa17.6■□□□□ 0.41
CD9-211ENST00000546073 CER1O95813 267 aa17.6■□□□□ 0.41
CD9-211ENST00000546073 PAK4O96013 591 aaPredicted RBP17.6■□□□□ 0.41
CD9-211ENST00000546073 IGHV4-34P06331 123 aa17.6■□□□□ 0.41
CD9-211ENST00000546073 PTPN3P26045 913 aa17.6■□□□□ 0.41
CD9-211ENST00000546073 RBL1P28749 1068 aa17.6■□□□□ 0.41
CD9-211ENST00000546073 STIP1P31948 543 aaKnown RBP17.6■□□□□ 0.41
CD9-211ENST00000546073 GRIA4P48058 902 aa17.6■□□□□ 0.41
CD9-211ENST00000546073 TAS2R38P59533 333 aa17.6■□□□□ 0.41
CD9-211ENST00000546073 GNG11P61952 73 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms