RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PPP1R2P41236 205 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 SUOXP51687 545 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 SNRPD1P62314 119 aaKnown RBP14.89□□□□□ -0.03
RTN3-214ENST00000545432 B4GALNT1Q00973 533 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 DEUP1Q05D60 604 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 KCNAB2Q13303 367 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 HLTFQ14527 1009 aaKnown RBP eCLIP14.89□□□□□ -0.03
RTN3-214ENST00000545432 NFATC4Q14934 902 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 IRF4Q15306 451 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 MANEALQ5VSG8 457 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 BORAQ6PGQ7 559 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 TTC7BQ86TV6 843 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 HCAR2Q8TDS4 363 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 NKD1Q969G9 470 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 KLHL32Q96NJ5 620 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 TBCBQ99426 244 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 APOOQ9BUR5 198 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 TM6SF2Q9BZW4 377 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 DOLKQ9UPQ8 538 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 RNF215Q9Y6U7 377 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 MYO9AB2RTY4 2548 aa14.89□□□□□ -0.03
RTN3-214ENST00000545432 NUDT21O43809 227 aaKnown RBP14.88□□□□□ -0.03
RTN3-214ENST00000545432 SMC2O95347 1197 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 GNA14O95837 355 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 UGT2B4P06133 528 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 CTSEP14091 401 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 CDH5P33151 784 aaPredicted RBP14.88□□□□□ -0.03
RTN3-214ENST00000545432 ACVRL1P37023 503 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 GEMIN4P57678 1058 aaKnown RBP14.88□□□□□ -0.03
RTN3-214ENST00000545432 SRP54P61011 504 aaKnown RBP14.88□□□□□ -0.03
RTN3-214ENST00000545432 NR1D2Q14995 579 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 C16orf72Q14CZ0 275 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 SKIDA1Q1XH10 827 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 KCTD16Q68DU8 428 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 ENPP7Q6UWV6 458 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 GDPD4Q6W3E5 623 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 NYAP1Q6ZVC0 841 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 ARCQ7LC44 396 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 NLRP14Q86W24 1093 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 HID1Q8IV36 788 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 ELOA2Q8IYF1 753 aaPredicted RBP14.88□□□□□ -0.03
RTN3-214ENST00000545432 FAM26EQ8N5C1 309 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 OR6K2Q8NGY2 324 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 GPBAR1Q8TDU6 330 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 NDFIP2Q9NV92 336 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 SIRPGQ9P1W8 387 aa14.88□□□□□ -0.03
RTN3-214ENST00000545432 PPP1R3GB7ZBB8 358 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 STMND1H3BQB6 276 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 HGSO14964 777 aaPredicted RBP14.87□□□□□ -0.03
RTN3-214ENST00000545432 B4GAT1O43505 415 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 SRGAP2O75044 1071 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 HOXC4P09017 264 aaPredicted RBP14.87□□□□□ -0.03
RTN3-214ENST00000545432 ITIH2P19823 946 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 HTR1BP28222 390 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 CD97P48960 835 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 SULT1E1P49888 294 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 POLE2P56282 527 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 SQSTM1Q13501 440 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 LRRC14Q15048 493 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 POLD3Q15054 466 aaPredicted RBP14.87□□□□□ -0.03
RTN3-214ENST00000545432 IGFBP7Q16270 282 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 C14orf28Q4W4Y0 310 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 EFHC2Q5JST6 749 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 TMEM164Q5U3C3 297 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 TRNP1Q6NT89 227 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 GJB7Q6PEY0 223 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 ZNF438Q7Z4V0 828 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 PTRH1Q86Y79 214 aaKnown RBP14.87□□□□□ -0.03
RTN3-214ENST00000545432 PASD1Q8IV76 773 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 CXorf40AQ8TE69 158 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 MAGEH1Q9H213 219 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 SEMA6CQ9H3T2 930 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 LRIT1Q9P2V4 623 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 SDK2Q58EX2 2172 aa14.87□□□□□ -0.03
RTN3-214ENST00000545432 TSPAN11A1L157 253 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 KRIT1O00522 736 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 TNFP01375 233 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 CCL4P13236 92 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 BMP6P22004 513 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 MAPKAPK2P49137 400 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 MAPK10P53779 464 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 STIM1Q13586 685 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 INPP5AQ14642 412 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 TRIM65Q6PJ69 517 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 IRF2BP1Q8IU81 584 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 Q8N9G6 341 aaPredicted RBP14.86□□□□□ -0.03
RTN3-214ENST00000545432 ATL2Q8NHH9 583 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 SMARCE1Q969G3 411 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 TIGD1Q96MW7 591 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 CATSPER2Q96P56 530 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 TAAR9Q96RI9 348 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 SPRY4Q9C004 299 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 TTYH3Q9C0H2 523 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 WDR70Q9NW82 654 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 TMEM248Q9NWD8 314 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 TMEM59LQ9UK28 342 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 NEU3Q9UQ49 428 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.86□□□□□ -0.03
RTN3-214ENST00000545432 LRRK1Q38SD2 2015 aa14.86□□□□□ -0.03
RTN3-214ENST00000545432 ICE1Q9Y2F5 2266 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms