RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 AK8Q96MA6 479 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CLUHP3Q96NS8 147 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 FIZ1Q96SL8 496 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 IL12RB2Q99665 862 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CALN1Q9BXU9 219 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 DNAI2Q9GZS0 605 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF768Q9H5H4 540 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 KIAA1586Q9HCI6 787 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 EPB41L5Q9HCM4 733 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 PDE11AQ9HCR9 933 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 PREBQ9HCU5 417 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ABCB8Q9NUT2 735 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ARHGAP20Q9P2F6 1191 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 DKK3Q9UBP4 350 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TCFL5Q9UL49 500 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CLEC4EQ9ULY5 219 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 PHTF1Q9UMS5 762 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF281Q9Y2X9 895 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 U3KQA8 63 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF638Q14966 1978 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TRIP11Q15643 1979 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 MYO9AB2RTY4 2548 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 A1L4Q6 167 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 A6NNZ2 444 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF891A8MT65 544 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 C1QTNF3-AMACRE9PGA6 284 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 STMND1H3BQB6 276 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 NTN3O00634 580 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 IRAK2O43187 625 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 MTSS1O43312 755 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 AQP9O43315 295 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 STX6O43752 255 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 RTN2O75298 545 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 GCNT3O95395 438 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 MOCS3O95396 460 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 THBDP07204 575 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 HMBSP08397 361 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 TNNI1P19237 187 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 HNRNPA2B1P22626 353 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 MAT2AP31153 395 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 DDIT3P35638 169 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 NNMTP40261 264 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 PGFP49763 221 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 PDX1P52945 283 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 CYP4F2P78329 520 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 EFEMP1Q12805 493 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 SRSF6Q13247 344 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 FGL2Q14314 439 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 TESK1Q15569 626 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 PRSS53Q2L4Q9 553 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 LACTB2Q53H82 288 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ADGRF1Q5T601 910 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 C9orf64Q5T6V5 341 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ACBD5Q5T8D3 534 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 CAPRIN2Q6IMN6 1127 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 DENND5AQ6IQ26 1287 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ESRP1Q6NXG1 681 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 NEK5Q6P3R8 708 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 PAQR9Q6ZVX9 377 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 STXBP4Q6ZWJ1 553 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 RSRC2Q7L4I2 434 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 TRAPPC11Q7Z392 1133 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 VASH2Q86V25 355 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ZC3H18Q86VM9 953 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 PARGQ86W56 976 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 DTX1Q86Y01 620 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 MFN1Q8IWA4 741 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 SYCP3Q8IZU3 236 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 FUKQ8N0W3 1084 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 TEX19Q8NA77 164 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF548Q8NEK5 533 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ZMIZ2Q8NF64 920 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 OR6C4Q8NGE1 309 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 OR5B17Q8NGF7 314 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 RASSF8Q8NHQ8 419 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 SLC2A14Q8TDB8 520 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 FRS2Q8WU20 508 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ASB11Q8WXH4 323 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 NINJ1Q92982 152 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 TTC17Q96AE7 1141 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 FAM131CQ96AQ9 280 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 MISP3Q96FF7 219 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 HRASLS5Q96KN8 279 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 SPAG5Q96R06 1193 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 GFM1Q96RP9 751 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 HAPLN3Q96S86 360 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 PLIN2Q99541 437 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 CGRRF1Q99675 332 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 CMKLR1Q99788 373 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 SMOQ99835 787 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC3Q9BQI4 270 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 FOXP3Q9BZS1 431 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 SYNDIG1Q9H7V2 258 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 MRPL44Q9H9J2 332 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 ATP13A1Q9HD20 1204 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 OLA1Q9NTK5 396 aaKnown RBP4.2□□□□□ -1.74
SNHG1-220ENST00000544550 OSER1Q9NX31 292 aa4.2□□□□□ -1.74
SNHG1-220ENST00000544550 DNAJC28Q9NX36 388 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms