RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 RHBDF2Q6PJF5 856 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 PRR23CQ6ZRP0 262 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 CLVS1Q8IUQ0 354 aaPredicted RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 RSPH9Q9H1X1 276 aaPredicted RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 MMADHCQ9H3L0 296 aaPredicted RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 AGO3Q9H9G7 860 aaKnown RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 DDX18Q9NVP1 670 aaKnown RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 MSRAQ9UJ68 235 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 LRCH1Q9Y2L9 728 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 VWA7Q9Y334 891 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 MAFBQ9Y5Q3 323 aaPredicted RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 C1QTNF3-AMACRE9PGA6 284 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 HDAC3O15379 428 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 UNC5CO95185 931 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 SLC25A14O95258 325 aaPredicted RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 AMD1P17707 334 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 ZIK1Q3SY52 487 aaPredicted RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 ANKRD23Q86SG2 305 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 FAM124AQ86V42 546 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 ZC3H7AQ8IWR0 971 aaKnown RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 C9orf16Q9BUW7 83 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 MIR1-1HGQ9H1L0 117 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 FOXO6A8MYZ6 492 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 ENTPD5O75356 428 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 MLYCDO95822 493 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 TKTP29401 623 aaKnown RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 CRTC3Q6UUV7 619 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 GPRIN3Q6ZVF9 776 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 MON1BQ7L1V2 547 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 PIWIL4Q7Z3Z4 852 aaKnown RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 TRABD2AQ86V40 505 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 PYROXD2Q8N2H3 581 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 EPS8L2Q9H6S3 715 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 BCAS3Q9H6U6 928 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 H0Y858 1186 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 ADAMTS3O15072 1205 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 DRD4P21917 467 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 PIK3R1P27986 724 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 HK2P52789 917 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 PSME3P61289 254 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 LIPMQ5VYY2 423 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 SLC24A5Q71RS6 500 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 PACS2Q86VP3 889 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 CYP4X1Q8N118 509 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 CD99L2Q8TCZ2 262 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 ANKRD49Q8WVL7 239 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 RNFT2Q96EX2 444 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 DEPDC7Q96QD5 511 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 REEP1Q9H902 201 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 C15orf41Q9Y2V0 281 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 FAM25AB3EWG3 89 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 FAM25CB3EWG5 89 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 FAM25GB3EWG6 89 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 PAICSP22234 425 aaKnown RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 IDH2P48735 452 aaKnown RBP12.87□□□□□ -0.35
CHD4-211ENST00000544484 SLC51AQ86UW1 340 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 COLGALT2Q8IYK4 626 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 ACMSDQ8TDX5 336 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 MAML3Q96JK9 1138 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 APOL4Q9BPW4 351 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 RAP2CQ9Y3L5 183 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 NR2E3Q9Y5X4 410 aa12.87□□□□□ -0.35
CHD4-211ENST00000544484 FGF1P05230 155 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 ENO2P09104 434 aaPredicted RBP12.86□□□□□ -0.35
CHD4-211ENST00000544484 TAF5Q15542 800 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 TEX44Q53QW1 395 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 POTEHQ6S545 545 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 LINGO4Q6UY18 593 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 LUZP2Q86TE4 346 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 PLD5Q8N7P1 536 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 WDR36Q8NI36 951 aaKnown RBP12.86□□□□□ -0.35
CHD4-211ENST00000544484 CXorf40BQ96DE9 158 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 COPS8Q99627 209 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 SYT17Q9BSW7 474 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 C12orf65Q9H3J6 166 aaKnown RBP12.86□□□□□ -0.35
CHD4-211ENST00000544484 SOHLH2Q9NX45 425 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 ATP6V1HQ9UI12 483 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 MYOM1P52179 1685 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 GLUD1P00367 558 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 VAV1P15498 845 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 OTOP2Q7RTS6 562 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 TFAP2BQ92481 460 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 RCN3Q96D15 328 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 DGCR6LQ9BY27 220 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 C6orf62Q9GZU0 229 aaPredicted RBP12.86□□□□□ -0.35
CHD4-211ENST00000544484 MYRFQ9Y2G1 1151 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 SNX10Q9Y5X0 201 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 C1RP00736 705 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 ANXA6P08133 673 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 TSHRP16473 764 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 NDUFV1P49821 464 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 MBTD1Q05BQ5 628 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 DGCR6Q14129 220 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 SQLEQ14534 574 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 MACC1Q6ZN28 852 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 LDB1Q86U70 411 aaPredicted RBP12.86□□□□□ -0.35
CHD4-211ENST00000544484 SLC4A5Q9BY07 1137 aa12.86□□□□□ -0.35
CHD4-211ENST00000544484 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms