RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CYS1Q717R9 158 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 RTL3Q8N8U3 475 aaKnown RBP15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 KLHL23Q8NBE8 558 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 SUSD3Q96L08 255 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 FAM96AQ9H5X1 160 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 CATSPERBQ9H7T0 1116 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 GKN1Q9NS71 199 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 SMPD4Q9NXE4 827 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 CCDC167Q9P0B6 97 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 FAM50BQ9Y247 325 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 AAR2Q9Y312 384 aaKnown RBP15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 CDY1Q9Y6F8 540 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 SF3B1O75533 1304 aaKnown RBP eCLIP15.9■□□□□ 0.149e-7■■■■□ 23
SNRNP70-203ENST00000544278 UBA6A0AVT1 1052 aaPredicted RBP15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 KCNU1A8MYU2 1149 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 CKBP12277 381 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 CCNCP24863 283 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 OR1E1P30953 314 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 CD151P48509 253 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 CDKN2DP55273 166 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 RPS24P62847 133 aaKnown RBP15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 PRAMEP78395 509 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 SEMG2Q02383 582 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 MARC1Q5VT66 337 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 TMEM207Q6UWW9 146 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 C16orf59Q7L2K0 433 aa15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 DNAJC1Q96KC8 554 aaKnown RBP15.9■□□□□ 0.14
SNRNP70-203ENST00000544278 HNRNPCL1O60812 293 aaKnown RBP15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 KLHL2O95198 593 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 IL1BP01584 269 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 HCAR3P49019 387 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 CDKN1CP49918 316 aaPredicted RBP15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 RAP1GDS1P52306 607 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 SLC12A1Q13621 1099 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 PLA2G4EQ3MJ16 856 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 DNAL1Q4LDG9 190 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 ARTNQ5T4W7 220 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 LIPMQ5VYY2 423 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 RNF19BQ6ZMZ0 732 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 FAM81AQ8TBF8 368 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 FCRL5Q96RD9 977 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 IL12RB2Q99665 862 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 BPIFA1Q9NP55 256 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 PCDHGB4Q9UN71 923 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 PCDHGB5Q9Y5G0 923 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 TRPM7Q96QT4 1865 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 TDRD15B5MCY1 1934 aaKnown RBP15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 M0QZQ0 153 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 MAGEC1O60732 1142 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 ANXA9O76027 345 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 SUPT7LO94864 414 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 MPOP05164 745 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 AQP4P55087 323 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 ECT2LQ008S8 904 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 DSC3Q14574 896 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 LINGO4Q6UY18 593 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 MRPL10Q7Z7H8 261 aaKnown RBP15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 DBF4BQ8NFT6 615 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 RPL10LQ96L21 214 aaKnown RBP15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 NACA2Q9H009 215 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 SMOC2Q9H3U7 446 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 MARCH2Q9P0N8 246 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 CHD7Q9P2D1 2997 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 DNAJA2O60884 412 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 IGLV3-25P01717 112 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 FCGRTP55899 365 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 C1QTNF8P60827 252 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 COG7P83436 770 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 CDC16Q13042 620 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 RANBP10Q6VN20 620 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 ZYG11AQ6WRX3 759 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 NUP93Q8N1F7 819 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 SCLYQ96I15 445 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 NSUN5Q96P11 429 aaKnown RBP15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 GPR78Q96P69 363 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 KCNA7Q96RP8 456 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 PCDHAC1Q9H158 963 aa15.89■□□□□ 0.13
SNRNP70-203ENST00000544278 GOLGA4Q13439 2230 aaKnown RBP15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 MATN2O00339 956 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 HDAC3O15379 428 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 MTSS1O43312 755 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 MAGEA12P43365 314 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 RGRP47804 291 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 ATN1P54259 1190 aaPredicted RBP15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 MS4A2Q01362 244 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 INSCQ1MX18 579 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 RTP2Q5QGT7 225 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 NSMCE3Q96MG7 304 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 GCNAQ96QF7 691 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 CHCHD3Q9NX63 227 aaKnown RBP15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 NCKIPSDQ9NZQ3 722 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 NYNRINQ9P2P1 1898 aaKnown RBP15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 CAPN8A6NHC0 703 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 A8MX80 341 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 NELFEP18615 380 aaKnown RBP15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 FGFR3P22607 806 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 GEMP55040 296 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 AP2B1P63010 937 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 SEMA3AQ14563 771 aa15.88■□□□□ 0.13
SNRNP70-203ENST00000544278 TRMT5Q32P41 509 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms