RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 CCL14Q16627 93 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 C6orf89Q6UWU4 347 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 BANPQ8N9N5 519 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 PIWIL1Q96J94 861 aaKnown RBP13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 TUBGCP5Q96RT8 1024 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 TRHDEQ9UKU6 1024 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 SNX8Q9Y5X2 465 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 SLX4Q8IY92 1834 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 STAU1O95793 577 aaKnown RBP13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 ALDH9A1P49189 494 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 ALDH6A1Q02252 535 aaKnown RBP13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 DDR2Q16832 855 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 SLC22A9Q8IVM8 553 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 SLC4A11Q8NBS3 891 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 RAET1EQ8TD07 263 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 LPGAT1Q92604 370 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 RORBQ92753 470 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 ZNF670Q9BS34 389 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 EBF2Q9HAK2 575 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 ZNF112Q9UJU3 913 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 PMM2O15305 246 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 CRTAMO95727 393 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 RAB10P61026 200 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 MFSD10Q14728 455 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 ADRM1Q16186 407 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 CPSF6Q16630 551 aaKnown RBP eCLIP13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 VPS26BQ4G0F5 336 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 PCID2Q5JVF3 399 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 PATL1Q86TB9 770 aaKnown RBP13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 CDH19Q9H159 772 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 DMAP1Q9NPF5 467 aaPredicted RBP13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 COQ4Q9Y3A0 265 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 PCNTO95613 3336 aa13.03□□□□□ -0.32
TUBGCP2-210ENST00000543663 CCDC189A1A4V9 331 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 PLIN3O60664 434 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 CYBBP04839 570 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 LTA4HP09960 611 aaKnown RBP13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 MATKP42679 507 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 WNT3AP56704 352 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 PPM1LQ5SGD2 360 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 FSTL4Q6MZW2 842 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 CAMK1DQ8IU85 385 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 ZNF614Q8N883 585 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 GIPC3Q8TF64 312 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 ZFRQ96KR1 1074 aaKnown RBP13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 FOPNLQ96NB1 174 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 GORASP1Q9BQQ3 440 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 SLC39A3Q9BRY0 314 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 SPAG4Q9NPE6 437 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 POMPQ9Y244 141 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 DGKBQ9Y6T7 804 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 MGAT4DA6NG13 374 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 CYP1A1P04798 512 aaPredicted RBP13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 SMIM10L2AP0DMW4 78 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 SMIM10L2BP0DMW5 78 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 LBPP18428 481 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 CHRNA4P43681 627 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 CPT1AP50416 773 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 CCR3P51677 355 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 PPIL2Q13356 520 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 ZNF618Q5T7W0 954 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 RPS27LQ71UM5 84 aaKnown RBP13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 FAM228AQ86W67 206 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 HERC6Q8IVU3 1022 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 SMARCD1Q96GM5 515 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 GLT1D1Q96MS3 346 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 CIPCQ9C0C6 399 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 ABCB10Q9NRK6 738 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 UXTQ9UBK9 157 aaPredicted RBP13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 SEPT3Q9UH03 358 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 LSM7Q9UK45 103 aaKnown RBP13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 INVSQ9Y283 1065 aa13.02□□□□□ -0.32
TUBGCP2-210ENST00000543663 NT5C1B-RDH14C9J2C7 533 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 FAM20BO75063 409 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 SPIDRQ14159 915 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 LIPMQ5VYY2 423 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 ANO7Q6IWH7 933 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 ESRP1Q6NXG1 681 aaKnown RBP13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 ANKS1BQ7Z6G8 1248 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 APLFQ8IW19 511 aaPredicted RBP13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 ADAM2Q99965 735 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 COMMD8Q9NX08 183 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 CIDEBQ9UHD4 219 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 ANAPC2Q9UJX6 822 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 MYOCOSA0A1B0GUC4 107 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 SMPD1P17405 629 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 ALDH7A1P49419 539 aaKnown RBP13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 DEFA1P59665 94 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 DEFA3P59666 94 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 GPX6P59796 221 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 MAP3K10Q02779 954 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 TYW3Q6IPR3 259 aaKnown RBP13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 GPSM1Q86YR5 675 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 ZNF276Q8N554 614 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 NACC2Q96BF6 587 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 FCRL2Q96LA5 508 aaPredicted RBP13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 TBC1D13Q9NVG8 400 aa13.02□□□□□ -0.33
TUBGCP2-210ENST00000543663 MORF4L1Q9UBU8 362 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms