RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 FAM35AQ86V20 835 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 MFSD6LQ8IWD5 586 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 HMGCLL1Q8TB92 370 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 GAB3Q8WWW8 586 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 ZUFSPQ96AP4 578 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 MARK4Q96L34 752 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 TRIM15Q9C019 465 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 WDCPQ9H6R7 721 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 COQ10BQ9H8M1 238 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 GLOD4Q9HC38 313 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 IGSF5Q9NSI5 407 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.84□□□□□ -0.19
VPS33A-208ENST00000543633 OR12D3Q9UGF7 316 aa13.84□□□□□ -0.19
VPS33A-208ENST00000543633 MBLAC1A4D2B0 266 aaPredicted RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 MRASO14807 208 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 IPO13O94829 963 aaKnown RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 MYL3P08590 195 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 C7P10643 843 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 NCAM1P13591 858 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 CPB1P15086 417 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 SAT1P21673 171 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 AKAP5P24588 427 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 HOXC13P31276 330 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 ADRA1AP35348 466 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 MSX2P35548 267 aaPredicted RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 SLC26A3P40879 764 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 LHX1P48742 406 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 MAP3K7CLP57077 242 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 TAS2R39P59534 338 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 MPP1Q00013 466 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 DENND5AQ6IQ26 1287 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 KRT80Q6KB66 452 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 PPP4R4Q6NUP7 873 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 CNSTQ6PJW8 725 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 HERC6Q8IVU3 1022 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 TRIML2Q8N7C3 387 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 MFSD2AQ8NA29 543 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 HEXDCQ8WVB3 486 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 RMND5BQ96G75 393 aaPredicted RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 OSMRQ99650 979 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 TRPV6Q9H1D0 765 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 TRPC7Q9HCX4 862 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 VPS45Q9NRW7 570 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 GALNT8Q9NY28 637 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 CROTQ9UKG9 612 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 FBXO5Q9UKT4 447 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 CNOT6Q9ULM6 557 aaKnown RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 MAGED2Q9UNF1 606 aaPredicted RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 SLC8A2Q9UPR5 921 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 TMEM233B4DJY2 109 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 GOLGA8TH3BQL2 631 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 FBP2O00757 339 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 FGF10O15520 208 aaPredicted RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 CELF2O95319 508 aaKnown RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 LTA4HP09960 611 aaKnown RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 ADCYAP1R1P41586 468 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 DUSP28Q4G0W2 176 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 AGKQ53H12 422 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 C6orf10Q5SRN2 563 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 UBXN11Q5T124 520 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 INTS11Q5TA45 600 aaKnown RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 LRRC49Q8IUZ0 686 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 CROCCP3Q8IVE0 287 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 DENND6AQ8IWF6 608 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 ATPAF2Q8N5M1 289 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 TNIP2Q8NFZ5 429 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 MIPOL1Q8TD10 442 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 LRTOMTQ8WZ04 291 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 SLCO4A1Q96BD0 722 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 MOCOSQ96EN8 888 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 SMOQ99835 787 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 CDHR5Q9HBB8 845 aa13.83□□□□□ -0.2
VPS33A-208ENST00000543633 PIN4Q9Y237 131 aaKnown RBP13.83□□□□□ -0.2
VPS33A-208ENST00000543633 PATJQ8NI35 1801 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 A8MT66 165 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 NRP2O60462 931 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 MYBPC3Q14896 1274 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 ZNF470Q6ECI4 717 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 TIGD7Q6NT04 549 aaPredicted RBP13.82□□□□□ -0.2
VPS33A-208ENST00000543633 ESRP1Q6NXG1 681 aaKnown RBP13.82□□□□□ -0.2
VPS33A-208ENST00000543633 OTOP3Q7RTS5 596 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 BHLHA9Q7RTU4 235 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 ERMP1Q7Z2K6 904 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 CUZD1Q86UP6 607 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 PCYOX1LQ8NBM8 494 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 OR2T34Q8NGX1 318 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 OR2T3Q8NH03 318 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 DNAJC1Q96KC8 554 aaKnown RBP13.82□□□□□ -0.2
VPS33A-208ENST00000543633 RANBP9Q96S59 729 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 TCF12Q99081 682 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 TMEM79Q9BSE2 394 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 FICDQ9BVA6 458 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 TKTL2Q9H0I9 626 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 FAM49AQ9H0Q0 323 aaPredicted RBP13.82□□□□□ -0.2
VPS33A-208ENST00000543633 CLK4Q9HAZ1 481 aaKnown RBP13.82□□□□□ -0.2
VPS33A-208ENST00000543633 PREBQ9HCU5 417 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 CRTAC1Q9NQ79 661 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 TBC1D13Q9NVG8 400 aa13.82□□□□□ -0.2
VPS33A-208ENST00000543633 ARHGEF38Q9NXL2 777 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms