RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 WDR93Q6P2C0 686 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 RFWD3Q6PCD5 774 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 TRPM8Q7Z2W7 1104 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 OR10G6Q8NH81 332 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 RERGQ96A58 199 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM120BQ96EK7 910 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CPXM1Q96SM3 734 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 TMPRSS4Q9NRS4 437 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 IMPAD1Q9NX62 359 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PCDHA11Q9Y5I1 949 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ANKRD26Q9UPS8 1709 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 XRN1Q8IZH2 1706 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 A0A0U1RQF3 1178 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 MYBPHLA2RUH7 354 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 DNM1LO00429 736 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 PHGDHO43175 533 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 TPST1O60507 370 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 MTRF1O75570 445 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 STBD1O95210 358 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 MMP8P22894 467 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 RRM2P31350 389 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 RAD23BP54727 409 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 AQP5P55064 265 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 WNT3AP56704 352 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CAP1Q01518 475 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SPIDRQ14159 915 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 GALNT3Q14435 633 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM45BPQ6NSW5 357 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC30A9Q6PML9 568 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CRTC3Q6UUV7 619 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM228AQ86W67 206 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 GPR135Q8IZ08 494 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CACTIN-AS1Q8N1I8 211 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM45AQ8TCE6 357 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 DTX3LQ8TDB6 740 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 HEXDCQ8WVB3 486 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ASB2Q96Q27 587 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 HGH1Q9BTY7 390 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 C16orf96A6NNT2 1141 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 NUDT19A8MXV4 375 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 MYO1CO00159 1063 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 COL6A1P12109 1028 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 RHOQP17081 205 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CLK1P49759 484 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF132P52740 706 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SEC13P55735 322 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CHRNB3Q05901 458 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 PWP1Q13610 501 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ERICH5Q6P6B1 374 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 JOSD2Q8TAC2 188 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 NSL1Q96IY1 281 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 MCCC1Q96RQ3 725 aaPredicted RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ZFYVE1Q9HBF4 777 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CLIC5Q9NZA1 410 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 GABRQQ9UN88 632 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 A0A087X1B8 175 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 E9PBE3 544 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 EPHB6O15197 1021 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 KLHL41O60662 606 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 F2P00734 622 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SERPINE1P05121 402 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ZSCAN5DPP0CG00 497 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ATP6V1C1P21283 382 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CLCN5P51795 746 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 GNA13Q14344 377 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 TEAD4Q15561 434 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 LRRC8BQ6P9F7 803 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 FBXO46Q6PJ61 603 aaPredicted RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC26A9Q7LBE3 791 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CENPLQ8N0S6 344 aaPredicted RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 RBFAQ8N0V3 343 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 STARD8Q92502 1023 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 DNAJC1Q96KC8 554 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 KREMEN1Q96MU8 473 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ARNT2Q9HBZ2 717 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 IMP3Q9NV31 184 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 HEY2Q9UBP5 337 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC38A8A6NNN8 435 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 RGS14O43566 566 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 IMPDH2P12268 514 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 GJA9P57773 515 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CRADDP78560 199 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 AGERQ15109 404 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF792Q3KQV3 632 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 TIGD5Q53EQ6 642 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ISLR2Q6UXK2 745 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM151BQ6UXP7 276 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 OTOP3Q7RTS5 596 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 LONP2Q86WA8 852 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 CERS2Q96G23 380 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 SEC16BQ96JE7 1060 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 COQ7Q99807 217 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM192AQ9GZU8 254 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 FANCEQ9HB96 536 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 FBXO6Q9NRD1 293 aaPredicted RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 MKS1Q9NXB0 559 aa6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 ZMAT5Q9UDW3 170 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 GOLGA4Q13439 2230 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-206ENST00000543397 RIPK2O43353 540 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms