RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 MYLKQ15746 1914 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 A0A1W2PQC6 194 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 TSPAN11A1L157 253 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 TMCO5BA8MYB1 307 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 LMO7DNF2Z398 122 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 ANXA6P08133 673 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 MYBL1P10243 752 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 TIMP2P16035 220 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 IGFALSP35858 605 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 CSNK1DP48730 415 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 OGDHQ02218 1023 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 PPARDQ03181 441 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 EIF2B5Q13144 721 aaKnown RBP13.25□□□□□ -0.29
RTN3-212ENST00000543123 UGP2Q16851 508 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 KLHL40Q2TBA0 621 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 TBC1D25Q3MII6 688 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 TMEM52BQ4KMG9 183 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 PRRT3Q5FWE3 981 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 LRRC73Q5JTD7 316 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 FAXCQ5TGI0 409 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 RFX8Q6ZV50 586 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 PHACTR4Q8IZ21 702 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 FSTL5Q8N475 847 aaPredicted RBP13.25□□□□□ -0.29
RTN3-212ENST00000543123 SYT11Q9BT88 431 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 CINPQ9BW66 212 aaPredicted RBP13.25□□□□□ -0.29
RTN3-212ENST00000543123 EDEM3Q9BZQ6 932 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 KLC2Q9H0B6 622 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 PDFQ9HBH1 243 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 TAS2R14Q9NYV8 317 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 AIPL1Q9NZN9 384 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 DOLKQ9UPQ8 538 aa13.25□□□□□ -0.29
RTN3-212ENST00000543123 TDRD6O60522 2096 aaKnown RBP13.25□□□□□ -0.29
RTN3-212ENST00000543123 LY6G6EA0A0G2JKS1 128 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 TMEM191CA6NGB0 347 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 TEX33O43247 280 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 CSO75390 466 aaKnown RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 TCEA3O75764 348 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 PALMO75781 387 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 PIGNO95427 931 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 FTLP02792 175 aaPredicted RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 ALPIP09923 528 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 EIF4A3P38919 411 aaKnown RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 PRKCIP41743 596 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 PAPOLAP51003 745 aaKnown RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 RENBPP51606 427 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 POLR2LP62875 67 aaKnown RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 TPM4P67936 248 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 KLHL30Q0D2K2 578 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 IRF4Q15306 451 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 ELOCQ15369 112 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 CYTH1Q15438 398 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 CDKN3Q16667 212 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 C6orf132Q5T0Z8 1188 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 ESRP1Q6NXG1 681 aaKnown RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 EFL1Q7Z2Z2 1120 aaKnown RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 SDR16C5Q8N3Y7 309 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 LZTR1Q8N653 840 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 TP53I13Q8NBR0 393 aaPredicted RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 VOPP1Q96AW1 172 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 ZNF653Q96CK0 615 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 CELF6Q96J87 481 aaKnown RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 ZNF578Q96N58 590 aaPredicted RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 LRRC61Q9BV99 259 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 HAUS4Q9H6D7 363 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 ZWILCHQ9H900 591 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 PCDH12Q9NPG4 1184 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 GPATCH2LQ9NWQ4 482 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 CNOT8Q9UFF9 292 aaKnown RBP13.24□□□□□ -0.29
RTN3-212ENST00000543123 PCSK1NQ9UHG2 260 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 KLF15Q9UIH9 416 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 ATP8A1Q9Y2Q0 1164 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 U3KQA8 63 aa13.24□□□□□ -0.29
RTN3-212ENST00000543123 CPED1A4D0V7 1026 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 EME2A4GXA9 379 aaPredicted RBP13.23□□□□□ -0.29
RTN3-212ENST00000543123 CFAP69A5D8W1 941 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 J3KR12 359 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 DFFAO00273 331 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 INSIG1O15503 277 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 ATMINO43313 823 aaPredicted RBP13.23□□□□□ -0.29
RTN3-212ENST00000543123 TLX3O43711 291 aaPredicted RBP13.23□□□□□ -0.29
RTN3-212ENST00000543123 LZTS3O60299 673 aaPredicted RBP13.23□□□□□ -0.29
RTN3-212ENST00000543123 USP12O75317 370 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 RASGRP1O95267 797 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 SERPINC1P01008 464 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 C6P13671 934 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 CTSEP14091 401 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 NFKBIAP25963 317 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 MMP12P39900 470 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 LSSP48449 732 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 HCAR3P49019 387 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 ZNF165P49910 485 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 PCBP4P57723 403 aaKnown RBP13.23□□□□□ -0.29
RTN3-212ENST00000543123 AP1S1P61966 158 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 GABREP78334 506 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 BCL2L1Q07817 233 aa13.23□□□□□ -0.29
RTN3-212ENST00000543123 COL9A2Q14055 689 aaPredicted RBP13.23□□□□□ -0.29
RTN3-212ENST00000543123 ACAP1Q15027 740 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms