RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 UROC1Q96N76 676 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 GAD1Q99259 594 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 NTRK1P04629 796 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 CRHR1P34998 444 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 MATKP42679 507 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 PSEN1P49768 467 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 RHBDL3P58872 404 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 GPR107Q5VW38 600 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 KRT77Q7Z794 578 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 CLNKQ7Z7G1 428 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 SLC44A1Q8WWI5 657 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 PNPOQ9NVS9 261 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 PLLPQ9Y342 182 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 SLC26A3P40879 764 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 HIRAP54198 1017 aaPredicted RBP13.2□□□□□ -0.3
TNC-212ENST00000542877 RPL38P63173 70 aaKnown RBP13.2□□□□□ -0.3
TNC-212ENST00000542877 CAPSQ13938 189 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 C16orf59Q7L2K0 433 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 ZFPM1Q8IX07 1006 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 IZUMO1Q8IYV9 350 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 GSTCDQ8NEC7 633 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 LGMNQ99538 433 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 MECRQ9BV79 373 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 GBA2Q9HCG7 927 aaPredicted RBP13.2□□□□□ -0.3
TNC-212ENST00000542877 S100A14Q9HCY8 104 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
TNC-212ENST00000542877 ARIH1Q9Y4X5 557 aaPredicted RBP13.2□□□□□ -0.3
TNC-212ENST00000542877 ERCC2P18074 760 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 ACVR2BQ13705 512 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 HIPK1Q86Z02 1210 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 IRF2BP1Q8IU81 584 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 OR5B17Q8NGF7 314 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 CAPSLQ8WWF8 208 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 GORASP1Q9BQQ3 440 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 PSME2Q9UL46 239 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 BTRCQ9Y297 605 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 CCDC182A6NF36 153 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 ZNF37AP17032 561 aaPredicted RBP13.19□□□□□ -0.3
TNC-212ENST00000542877 BNIP1Q12981 228 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 PTPRNQ16849 979 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 PERM1Q5SV97 790 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 CDYL2Q8N8U2 506 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 ZFP28Q8NHY6 868 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 PPP1R14AQ96A00 147 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 LHX5Q9H2C1 402 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 MAGEL2Q9UJ55 1249 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 ZNF232Q9UNY5 417 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 STON1Q9Y6Q2 735 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 ARHGAP23Q9P227 1491 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 SH3BGRLO75368 114 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 MTA2O94776 668 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 DBTP11182 482 aaKnown RBP13.19□□□□□ -0.3
TNC-212ENST00000542877 SKP1P63208 163 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 SPIDRQ14159 915 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 GPR180Q86V85 440 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 RIOX2Q8IUF8 465 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 TBC1D21Q8IYX1 336 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 TMEM109Q9BVC6 243 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 ERVK-5Q9HDB9 667 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 MAGEC1O60732 1142 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 AVILO75366 819 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 HNRNPLP14866 589 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNC-212ENST00000542877 NOMO1Q15155 1222 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 RAP1GAP2Q684P5 730 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 ARMC8Q8IUR7 673 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 OR52L1Q8NGH7 329 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 PSMA8Q8TAA3 256 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 SLC38A2Q96QD8 506 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 RHOJQ9H4E5 214 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 MBD2Q9UBB5 411 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 SLC12A4Q9UP95 1085 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 NRCAMQ92823 1304 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 BCL9O00512 1426 aa13.19□□□□□ -0.3
TNC-212ENST00000542877 RNF225M0QZC1 329 aaPredicted RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 SHOX2O60902 331 aaPredicted RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 UMPSP11172 480 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 ACADMP11310 421 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 EPHX2P34913 555 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 TNFSF9P41273 254 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 SLC7A2P52569 658 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 HSPA14Q0VDF9 509 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 PABPC1LQ4VXU2 614 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 PLPPR4Q7Z2D5 763 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 FAM20CQ8IXL6 584 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 C4orf32Q8N8J7 132 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 ELMO1Q92556 727 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 BORCS5Q969J3 196 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 NFKBIL1Q9UBC1 381 aaPredicted RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 HBS1LQ9Y450 684 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 PTCH2Q9Y6C5 1203 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 TM7SF2O76062 418 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 ALOX5P09917 674 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 TPSB2P20231 275 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 CCT3P49368 545 aaKnown RBP13.18□□□□□ -0.3
TNC-212ENST00000542877 TPSAB1Q15661 275 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 HLA-DQA1Q5Y7H0 255 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 DENND5AQ6IQ26 1287 aa13.18□□□□□ -0.3
TNC-212ENST00000542877 KIAA0319LQ8IZA0 1049 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms