RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-219	ENST00000542848	WASH4P	A8MWX3	477 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	MUSK	O15146	869 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	YY2	O15391	372 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	KLK10	O43240	276 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	GJB6	O95452	261 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	TSHR	P16473	764 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	EPHB2	P29323	1055 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	MLLT3	P42568	568 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	KLK7	P49862	253 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	BLK	P51451	505 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	AIF1	P55008	147 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	RHOA	P61586	193 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	SKOR1	P84550	965 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	PPARD	Q03181	441 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	CFHR1	Q03591	330 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	ELP6	Q0PNE2	266 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	SERINC3	Q13530	473 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	C1orf61	Q13536	156 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	GRM3	Q14832	879 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	KRT31	Q15323	416 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	ELOC	Q15369	112 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	TMEM52B	Q4KMG9	183 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	EFHC2	Q5JST6	749 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	PERM1	Q5SV97	790 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	FKBP15	Q5T1M5	1219 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	CDKAL1	Q5VV42	579 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	ESRP1	Q6NXG1	681 aa	Known RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	LVRN	Q6Q4G3	990 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	ZNF605	Q86T29	641 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	SLC35F3	Q8IY50	421 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	SDR16C5	Q8N3Y7	309 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	FSTL5	Q8N475	847 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	C3orf20	Q8ND61	904 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	SNRNP27	Q8WVK2	155 aa	Known RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	SCG3	Q8WXD2	468 aa	Known RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	PRR11	Q96HE9	360 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	PCDHB18P	Q96TA0	734 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	EPAS1	Q99814	870 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	LRRC61	Q9BV99	259 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	CLPB	Q9H078	707 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	KLC2	Q9H0B6	622 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	CATSPERB	Q9H7T0	1116 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	CPNE5	Q9HCH3	593 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	NLRC4	Q9NPP4	1024 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	MBNL1	Q9NR56	388 aa	Known RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	PADI4	Q9UM07	663 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848	AHCTF1	Q8WYP5	2266 aa		11.99	□□□□□ -0.49
PTPN6-219	ENST00000542848		A0A1W2PNU3	283 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	GOLGA6L3	A6NEY3	463 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	CDRT15L2	A8MXV6	281 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	RASA4B	C9J798	803 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	EPHB6	O15197	1021 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	RASA4	O43374	803 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	ITIH2	P19823	946 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	XPA	P23025	273 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	ZNF143	P52747	638 aa	Predicted RBP	11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	HK3	P52790	923 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	LRRC14	Q15048	493 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	AGER	Q15109	404 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	CLEC16A	Q2KHT3	1053 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	PARP15	Q460N3	678 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	LRRC73	Q5JTD7	316 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	ARHGAP40	Q5TG30	622 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	SASS6	Q6UVJ0	657 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	UMODL1-AS1	Q8N2C9	162 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	PYROXD2	Q8N2H3	581 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	ARL14	Q8N4G2	192 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	WDR36	Q8NI36	951 aa	Known RBP	11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	HMCES	Q96FZ2	354 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	CCDC3	Q9BQI4	270 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	TSPY26P	Q9H489	355 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	DONSON	Q9NYP3	566 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	FZD10	Q9ULW2	581 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	SIK3	Q9Y2K2	1263 aa		11.98	□□□□□ -0.49
PTPN6-219	ENST00000542848	TCRBV5S1A1T	A0A578	114 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	TSPAN11	A1L157	253 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	ANKRD62	A6NC57	917 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	NTN3	O00634	580 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	INSIG1	O15503	277 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	FGF10	O15520	208 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	CCP110	O43303	1012 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	ALPI	P09923	528 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	CTSE	P14091	401 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	PLA2G2A	P14555	144 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	HTR7	P34969	479 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	C1QBP	Q07021	282 aa	Known RBP	11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	VAC14	Q08AM6	782 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	SPIDR	Q14159	915 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	IRF4	Q15306	451 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	SYCP1	Q15431	976 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	CYTH1	Q15438	398 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	UGP2	Q16851	508 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	TAF1B	Q53T94	588 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	SCYL2	Q6P3W7	929 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	CRTC1	Q6UUV9	634 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	MON1B	Q7L1V2	547 aa		11.97	□□□□□ -0.49
PTPN6-219	ENST00000542848	CLEC14A	Q86T13	490 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms