RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 C19orf43Q9BQ61 176 aa9.95□□□□□ -0.82
SS18-205ENST00000542420 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
SS18-205ENST00000542420 COG4Q9H9E3 785 aa9.95□□□□□ -0.82
SS18-205ENST00000542420 PDFQ9HBH1 243 aa9.95□□□□□ -0.82
SS18-205ENST00000542420 EML4Q9HC35 981 aaKnown RBP9.95□□□□□ -0.82
SS18-205ENST00000542420 TCF7L2Q9NQB0 619 aa9.95□□□□□ -0.82
SS18-205ENST00000542420 UBP1Q9NZI7 540 aa9.95□□□□□ -0.82
SS18-205ENST00000542420 NCKIPSDQ9NZQ3 722 aa9.95□□□□□ -0.82
SS18-205ENST00000542420 MPP6Q9NZW5 540 aa9.95□□□□□ -0.82
SS18-205ENST00000542420 MAFFQ9ULX9 164 aa9.95□□□□□ -0.82
SS18-205ENST00000542420 RUVBL2Q9Y230 463 aaKnown RBP9.95□□□□□ -0.82
SS18-205ENST00000542420 ANAPC1Q9H1A4 1944 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 C2orf71A6NGG8 1288 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 PMPCBO75439 489 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 MOCS2O96007 188 aaPredicted RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 THRAP10827 490 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 ATP6V1C1P21283 382 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 ARRB2P32121 409 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 ETFBP38117 255 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 GRIA4P48058 902 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 PGFP49763 221 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 SUOXP51687 545 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 CDH4P55283 916 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 USP46P62068 366 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 AP2B1P63010 937 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 ROR2Q01974 943 aaKnown RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 EFEMP1Q12805 493 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 SLC8B1Q6J4K2 584 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 LRRC43Q8N309 656 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 ZNF781Q8N8C0 355 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 RP9Q8TA86 221 aaKnown RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 ZIC5Q96T25 663 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 DDX50Q9BQ39 737 aaKnown RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 ZNF385DQ9H6B1 395 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 CWH43Q9H720 699 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 ZNF358Q9NW07 568 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 IL1RAPL1Q9NZN1 696 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 MTRRQ9UBK8 725 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 NKX1-2Q9UD57 310 aaPredicted RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 BCAP29Q9UHQ4 241 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 LRFN2Q9ULH4 789 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 ARHGAP26Q9UNA1 814 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 PRG3Q9Y2Y8 225 aaPredicted RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 F5H5T6 163 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 F8W810 466 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 CXCL10P02778 98 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 LTA4HP09960 611 aaKnown RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 ATXN1LP0C7T5 689 aaKnown RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 TACR2P21452 398 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 CD9P21926 228 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 RPL26P61254 145 aaKnown RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 TAF10Q12962 218 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 KPNB1Q14974 876 aaKnown RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 DLG2Q15700 870 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 CCDC6Q16204 474 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 CNGA3Q16281 694 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 KHDC1Q4VXA5 237 aaKnown RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 TECRLQ5HYJ1 363 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 RALGPS1Q5JS13 557 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 C10orf120Q5SQS8 335 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 ZNF470Q6ECI4 717 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 RFWD3Q6PCD5 774 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 C16orf89Q6UX73 402 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 NAPRTQ6XQN6 538 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 CILP2Q8IUL8 1156 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 SLC41A1Q8IVJ1 513 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 PPFIBP2Q8ND30 876 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 KCTD4Q8WVF5 259 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 NAF1Q96HR8 494 aaKnown RBP9.94□□□□□ -0.82
SS18-205ENST00000542420 ELMO2Q96JJ3 720 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 SCYL1Q96KG9 808 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 UBXN10Q96LJ8 280 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 FAM161BQ96MY7 647 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 MGME1Q9BQP7 344 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 TTPALQ9BTX7 342 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 CAB39LQ9H9S4 337 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 NT5MQ9NPB1 228 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 DNMT3LQ9UJW3 386 aa9.94□□□□□ -0.82
SS18-205ENST00000542420 LTBP2Q14767 1821 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 SLC12A8A0AV02 714 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 SLC38A8A6NNN8 435 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 MAP3K13O43283 966 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 ACSL4O60488 711 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 ENTPD5O75356 428 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 GRK4P32298 578 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 PTDSS1P48651 473 aaKnown RBP9.93□□□□□ -0.82
SS18-205ENST00000542420 SLC11A1P49279 550 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 SLC11A2P49281 568 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 TAS2R39P59534 338 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 XIAPP98170 497 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 KLF10Q13118 480 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 UBAP2LQ14157 1087 aaKnown RBP9.93□□□□□ -0.82
SS18-205ENST00000542420 TMC7Q7Z402 723 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 FAM126BQ8IXS8 530 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 GPR65Q8IYL9 337 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 RNF168Q8IYW5 571 aaPredicted RBP9.93□□□□□ -0.82
SS18-205ENST00000542420 ZFAND2BQ8WV99 257 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 TCF12Q99081 682 aa9.93□□□□□ -0.82
SS18-205ENST00000542420 OMDQ99983 421 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms