RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SFTPA2Q8IWL1 248 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 ARHGAP12Q8IWW6 846 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 NPWQ8N729 165 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 PLA2G15Q8NCC3 412 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 ATXN7L3BQ96GX2 97 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 HIC2Q96JB3 615 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 SNRNP25Q9BV90 132 aaKnown RBP20.07■□□□□ 0.8
DDX11-220ENST00000542244 DUSP23Q9BVJ7 150 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 BOCQ9BWV1 1114 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 TMEM63CQ9P1W3 806 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 UBA2Q9UBT2 640 aaPredicted RBP20.07■□□□□ 0.8
DDX11-220ENST00000542244 RABGEF1Q9UJ41 708 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 AP4E1Q9UPM8 1137 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 PTPRQQ9UMZ3 2332 aa20.07■□□□□ 0.8
DDX11-220ENST00000542244 TSPAN11A1L157 253 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 EME2A4GXA9 379 aaPredicted RBP20.06■□□□□ 0.8
DDX11-220ENST00000542244 LRRC53A6NM62 1247 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 H3BM21 787 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 PRAMEF11O60813 436 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 C6P13671 934 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 FERP16591 822 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 ACTN2P35609 894 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 THOP1P52888 689 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 PDX1P52945 283 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 TPI1P60174 286 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 TYRO3Q06418 890 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 ALG11Q2TAA5 492 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 FAXCQ5TGI0 409 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 PLEKHA7Q6IQ23 1121 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 LRRC69Q6ZNQ3 347 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 ZNF571Q7Z3V5 609 aaPredicted RBP20.06■□□□□ 0.8
DDX11-220ENST00000542244 TSEN2Q8NCE0 465 aaKnown RBP20.06■□□□□ 0.8
DDX11-220ENST00000542244 PRR11Q96HE9 360 aaPredicted RBP20.06■□□□□ 0.8
DDX11-220ENST00000542244 FCRL3Q96P31 734 aaPredicted RBP20.06■□□□□ 0.8
DDX11-220ENST00000542244 DEPDC7Q96QD5 511 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 CPEB1Q9BZB8 566 aaKnown RBP20.06■□□□□ 0.8
DDX11-220ENST00000542244 ABCG4Q9H172 646 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 SUV39H2Q9H5I1 410 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 DHX35Q9H5Z1 703 aaKnown RBP20.06■□□□□ 0.8
DDX11-220ENST00000542244 CATSPERBQ9H7T0 1116 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 ASCL3Q9NQ33 180 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 SALL4Q9UJQ4 1053 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 OR1A2Q9Y585 309 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 ENTPD2Q9Y5L3 495 aa20.06■□□□□ 0.8
DDX11-220ENST00000542244 RRP8O43159 456 aaKnown RBP20.05■□□□□ 0.8
DDX11-220ENST00000542244 TCF4P15884 667 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 TNFAIP3P21580 790 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 PSMA2P25787 234 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 DUSP3P51452 185 aaPredicted RBP20.05■□□□□ 0.8
DDX11-220ENST00000542244 UGP2Q16851 508 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 AFMIDQ63HM1 303 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 MACC1Q6ZN28 852 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 ZSCAN30Q86W11 494 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 PELI3Q8N2H9 469 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 CASKIN2Q8WXE0 1202 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 IL12RB2Q99665 862 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 RTN4Q9NQC3 1192 aaKnown RBP20.05■□□□□ 0.8
DDX11-220ENST00000542244 SPASTQ9UBP0 616 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 SATB2Q9UPW6 733 aa20.05■□□□□ 0.8
DDX11-220ENST00000542244 TMEM191CA6NGB0 347 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 LMO7DNF2Z398 122 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 RIOK3O14730 519 aaKnown RBP20.04■□□□□ 0.8
DDX11-220ENST00000542244 TPP1O14773 563 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 GM2AP17900 193 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 LIG3P49916 1009 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 RAD51Q06609 339 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 RALGDSQ12967 914 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 INPP5AQ14642 412 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 NR0B2Q15466 257 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 ANO6Q4KMQ2 910 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 C3orf38Q5JPI3 329 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 C6orf132Q5T0Z8 1188 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 HID1Q8IV36 788 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 ANKRD20A12PQ8NF67 263 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 ARHGEF26Q96DR7 871 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 NAP1L5Q96NT1 182 aaPredicted RBP20.04■□□□□ 0.8
DDX11-220ENST00000542244 NCAPGQ9BPX3 1015 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.04■□□□□ 0.8
DDX11-220ENST00000542244 POLR1BQ9H9Y6 1135 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 USP29Q9HBJ7 922 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 SIRPGQ9P1W8 387 aa20.04■□□□□ 0.8
DDX11-220ENST00000542244 RP1P56715 2156 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 ANKRD62A6NC57 917 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 A8MX80 341 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 EEF2KO00418 725 aaKnown RBP20.03■□□□□ 0.8
DDX11-220ENST00000542244 DDX3XO00571 662 aaKnown RBP eCLIP20.03■□□□□ 0.8
DDX11-220ENST00000542244 FGF10O15520 208 aaPredicted RBP20.03■□□□□ 0.8
DDX11-220ENST00000542244 LZTS3O60299 673 aaPredicted RBP20.03■□□□□ 0.8
DDX11-220ENST00000542244 PCCBP05166 539 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 SKILP12757 684 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 ERCC2P18074 760 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 MIPP30301 263 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 MMP12P39900 470 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 LSSP48449 732 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 YPEL5P62699 121 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 PPARDQ03181 441 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 LRRC14Q15048 493 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 PTPRRQ15256 657 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 ENPP7Q6UWV6 458 aa20.03■□□□□ 0.8
DDX11-220ENST00000542244 RFX8Q6ZV50 586 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms