RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TPRG1LQ5T0D9 272 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 NAPEPLDQ6IQ20 393 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 AADACL2Q6P093 401 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 SPOCD1Q6ZMY3 1216 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 DBX2Q6ZNG2 339 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 GCNT7Q6ZNI0 430 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 VSIG1Q86XK7 387 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 RFX6Q8HWS3 928 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 LRRC49Q8IUZ0 686 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 KATNAL2Q8IYT4 538 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 RCOR2Q8IZ40 523 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.82□□□□□ -0.84
YBX3-212ENST00000542002 CNTD1Q8N815 330 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 MFSD2AQ8NA29 543 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 ARRDC2Q8TBH0 407 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 ALG3Q92685 438 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 FATE1Q969F0 183 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 FUBP1Q96AE4 644 aaKnown RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 RAB7BQ96AH8 199 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 CENPTQ96BT3 561 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 OLFM3Q96PB7 478 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 SMIM14Q96QK8 99 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 NUDCD1Q96RS6 583 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 TUBGCP5Q96RT8 1024 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 WRAP53Q9BUR4 548 aaKnown RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 MAK16Q9BXY0 300 aaKnown RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 ZDHHC5Q9C0B5 715 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 MBNL1Q9NR56 388 aaKnown RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 RBM22Q9NW64 420 aaKnown RBP eCLIP9.82□□□□□ -0.847e-6■■■■□ 24.6
YBX3-212ENST00000542002 DDX56Q9NY93 547 aaKnown RBP9.82□□□□□ -0.84
YBX3-212ENST00000542002 PCDHA3Q9Y5H8 950 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
YBX3-212ENST00000542002 hCG_1818297A0A087WSY0 165 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 A0A0U1RQS6 177 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 MACROD2A1Z1Q3 448 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 A8MX80 341 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 KCNK1O00180 336 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 APOL1O14791 398 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 HTRA2O43464 458 aaPredicted RBP9.81□□□□□ -0.84
YBX3-212ENST00000542002 SH3BP5O60239 455 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 CST8O60676 142 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 OPHN1O60890 802 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 ZRANB2O95218 330 aaKnown RBP eCLIP9.81□□□□□ -0.84
YBX3-212ENST00000542002 JCHAINP01591 159 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 HLA-DQB2P05538 268 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 MMP2P08253 660 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 PDHA1P08559 390 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 GM2AP17900 193 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 CTNNA1P35221 906 aaKnown RBP9.81□□□□□ -0.84
YBX3-212ENST00000542002 RENBPP51606 427 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 ATXN3P54252 364 aaPredicted RBP9.81□□□□□ -0.84
YBX3-212ENST00000542002 NXPH1P58417 271 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 AP1S1P61966 158 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 IL9RQ01113 521 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 DSC2Q02487 901 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 BCL2L1Q07817 233 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 PPIDQ08752 370 aaKnown RBP9.81□□□□□ -0.84
YBX3-212ENST00000542002 RALGDSQ12967 914 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 ZBTB17Q13105 803 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 ZNF235Q14590 738 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 STAT4Q14765 748 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 GRM3Q14832 879 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 TEAD4Q15561 434 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 ZNF423Q2M1K9 1284 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 PPM1JQ5JR12 505 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 KAZNQ674X7 775 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 KIAA1161Q6NSJ0 714 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 BRAT1Q6PJG6 821 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 NYAP1Q6ZVC0 841 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 NT5DC3Q86UY8 548 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 LRRC8AQ8IWT6 810 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 SLC22A18ASQ8N1D0 253 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 CCNYQ8ND76 341 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 DEFB124Q8NES8 71 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 OR13H1Q8NG92 308 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 EXD1Q8NHP7 514 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 KIAA1524Q8TCG1 905 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 HDAC11Q96DB2 347 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 LENG8Q96PV6 779 aaPredicted RBP9.81□□□□□ -0.84
YBX3-212ENST00000542002 SEMA3CQ99985 751 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 HEMGNQ9BXL5 484 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 CEP41Q9BYV8 373 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 ATP13A3Q9H7F0 1226 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 LUC7LQ9NQ29 371 aaKnown RBP9.81□□□□□ -0.84
YBX3-212ENST00000542002 SCUBE2Q9NQ36 999 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 TPX2Q9ULW0 747 aaKnown RBP9.81□□□□□ -0.84
YBX3-212ENST00000542002 DMTF1Q9Y222 760 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 BTBD3Q9Y2F9 522 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 ATP8A1Q9Y2Q0 1164 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 COQ6Q9Y2Z9 468 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 RALGAPA1Q6GYQ0 2036 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 SPTBN4Q9H254 2564 aa9.81□□□□□ -0.84
YBX3-212ENST00000542002 ADAMTS9Q9P2N4 1935 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 GOLGA8CPA6NN73 597 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 UPK3BL1B0FP48 263 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 UPK3BL2E5RIL1 263 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 NEMP1O14524 444 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 FZD6O60353 706 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 CBFA2T3O75081 653 aa9.8□□□□□ -0.84
YBX3-212ENST00000542002 PRLP01236 227 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms