RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 TPX2Q9ULW0 747 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 SATB2Q9UPW6 733 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 ALG6Q9Y672 507 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 CXorf51AA0A1B0GTR3 108 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 ILVBLA1L0T0 632 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 TMEM110-MUSTN1A8MSY1 372 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 ZNF487B1APH4 448 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 PRAMEF26H0Y7S4 382 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 H3BRJ5 948 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 EEF2KO00418 725 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 LATO43561 262 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 PSTPIP1O43586 416 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 BUB1O43683 1085 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 SPOPO43791 374 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 CREB3O43889 395 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 FLNBO75369 2602 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 PRLRP16471 622 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 COMTP21964 271 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 OR1E1P30953 314 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 DRD3P35462 400 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 DEKP35659 375 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 ARL4AP40617 200 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 SSR1P43307 286 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 LSSP48449 732 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 DUSP3P51452 185 aaPredicted RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 ARSEP51690 589 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 TAS2R40P59535 323 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 TPI1P60174 286 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 OVGP1Q12889 678 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 ELAVL3Q14576 367 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 PDK2Q15119 407 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 SMTNL2Q2TAL5 461 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 ZNF542PQ5EBM4 170 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 RWDD4Q6NW29 188 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 CCDC81Q6ZN84 652 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 DAAM2Q86T65 1068 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 IQCHQ86VS3 1027 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 CPNE8Q86YQ8 564 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 MAP7D3Q8IWC1 876 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 RHOT1Q8IXI2 618 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 RTL3Q8N8U3 475 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 LRRC57Q8N9N7 239 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 KDM1BQ8NB78 822 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 IFI44Q8TCB0 444 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 OR8D1Q8WZ84 308 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 HSPH1Q92598 858 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 ALG14Q96F25 216 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 KCNF1Q9H3M0 494 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 FZD3Q9NPG1 666 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 EVA1BQ9NVM1 165 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 CWC15Q9P013 229 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 DMTF1Q9Y222 760 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 OR51B4Q9Y5P0 310 aa8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 ARID1BQ8NFD5 2236 aaPredicted RBP8.84□□□□□ -0.99
CLSTN3-212ENST00000541770 TENM4Q6N022 2769 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 A0A0U1RQJ8 604 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 CPED1A4D0V7 1026 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 GRID2IPA4D2P6 1211 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 C1QTNF3-AMACRE9PGA6 284 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 PLRG1O43660 514 aaKnown RBP8.83□□□□□ -1
CLSTN3-212ENST00000541770 RNGTTO60942 597 aaKnown RBP8.83□□□□□ -1
CLSTN3-212ENST00000541770 NEBLO76041 1014 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 DXOO77932 396 aaKnown RBP8.83□□□□□ -1
CLSTN3-212ENST00000541770 RHOCP08134 193 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 CKMT1AP12532 417 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 NUDT1P36639 197 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 ETFBP38117 255 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 VASPP50552 380 aaPredicted RBP8.83□□□□□ -1
CLSTN3-212ENST00000541770 NAP1L1P55209 391 aaKnown RBP8.83□□□□□ -1
CLSTN3-212ENST00000541770 CDH6P55285 790 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 YBEYP58557 167 aaPredicted RBP8.83□□□□□ -1
CLSTN3-212ENST00000541770 SULT2A1Q06520 285 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 CNTN1Q12860 1018 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 DPYSQ14117 519 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 ATP13A4Q4VNC1 1196 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 PPP6R3Q5H9R7 873 aaPredicted RBP8.83□□□□□ -1
CLSTN3-212ENST00000541770 FAM46CQ5VWP2 391 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 CDCP2Q5VXM1 449 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 CRTC1Q6UUV9 634 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 RFX8Q6ZV50 586 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 TFAP2DQ7Z6R9 452 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 DSG4Q86SJ6 1040 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 SYCE1Q8N0S2 351 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 UMODL1-AS1Q8N2C9 162 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 LZTR1Q8N653 840 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 OR52K2Q8NGK3 314 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 KIAA1524Q8TCG1 905 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 FAF2Q96CS3 445 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 CCDC97Q96F63 343 aaPredicted RBP8.83□□□□□ -1
CLSTN3-212ENST00000541770 CSPG4P5Q96PW8 444 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 ARHGAP9Q9BRR9 750 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 ZNF670Q9BS34 389 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 FEM1AQ9BSK4 669 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 MAGEH1Q9H213 219 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 KDM4CQ9H3R0 1056 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 SYNDIG1Q9H7V2 258 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 PCDH18Q9HCL0 1135 aa8.83□□□□□ -1
CLSTN3-212ENST00000541770 ASCL3Q9NQ33 180 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms