RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SRCAPQ6ZRS2 3230 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 KDM3AQ9Y4C1 1321 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 TMEM94Q12767 1356 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 A8MV72 311 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 E5RJQ4 531 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 BCAT2O15382 392 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 PRAMEF2O60811 474 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 EIF2S1P05198 315 aaKnown RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 IRF1P10914 325 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 ARSAP15289 507 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 ATF7P17544 494 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 FMO4P31512 558 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 CPOXP36551 454 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 HADHAP40939 763 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 PLCD1P51178 756 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 OLR1P78380 273 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 TMEM115Q12893 351 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 MFSD13AQ14CX5 517 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 VEPH1Q14D04 833 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 RABEP1Q15276 862 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 AWAT1Q58HT5 328 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 MTFR2Q6P444 385 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 KLHL35Q6PF15 583 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 NCEH1Q6PIU2 408 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 KYAT3Q6YP21 454 aaKnown RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 SLC46A3Q7Z3Q1 461 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 TADA2BQ86TJ2 420 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 CADM4Q8NFZ8 388 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 OSR1Q8TAX0 266 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 INTS12Q96CB8 462 aaKnown RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 TTC14Q96N46 770 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 IFT27Q9BW83 186 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 SPRTNQ9H040 489 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 ARL8BQ9NVJ2 186 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 ZDHHC7Q9NXF8 308 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 ARL15Q9NXU5 204 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 ELOVL5Q9NYP7 299 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 MRPL15Q9P015 296 aaKnown RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 CPSF2Q9P2I0 782 aaKnown RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 B3GNT3Q9Y2A9 372 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 ZC3H13Q5T200 1668 aaKnown RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 INO80Q9ULG1 1556 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-217ENST00000541578 AFF2P51816 1311 aa4.44□□□□□ -1.7
SNHG1-217ENST00000541578 SYCP2Q9BX26 1530 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 GPATCH8Q9UKJ3 1502 aaKnown RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 SHPRHQ149N8 1683 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 TMEM247A6NEH6 219 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 LIPT2A6NK58 231 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 FYB1O15117 783 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 TBCAO75347 108 aaKnown RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 BMP15O95972 392 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 IL1AP01583 271 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 HLA-DQA2P01906 255 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 VDRP11473 427 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 RARGP13631 454 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 KRT10P13645 584 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 ZNF8P17098 575 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 CDH2P19022 906 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 TGM2P21980 687 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 NDUFS1P28331 727 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 AVPR2P30518 371 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 CTNNA1P35221 906 aaKnown RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 MRPL12P52815 198 aaKnown RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 SHC2P98077 582 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 CDC16Q13042 620 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 FRG1Q14331 258 aaKnown RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 SLC18A3Q16572 532 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 Q4G0T1 1027 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 GJB7Q6PEY0 223 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 SARM1Q6SZW1 724 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 IL20RBQ6UXL0 311 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 FAM83HQ6ZRV2 1179 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 PRPF39Q86UA1 669 aaKnown RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 LAS2Q8IYD9 372 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 ADGRF2Q8IZF7 708 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 CPXM2Q8N436 756 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 WDTC1Q8N5D0 677 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 NANOGP1Q8N7R0 232 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-217ENST00000541578 MAP4K1Q92918 833 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 HIC2Q96JB3 615 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 GPR78Q96P69 363 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 SLC35C2Q9NQQ7 365 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 TAB2Q9NYJ8 693 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 MTMR6Q9Y217 621 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 CASKIN1Q8WXD9 1431 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 UBR1Q8IWV7 1749 aa4.43□□□□□ -1.7
SNHG1-217ENST00000541578 MTUS2Q5JR59 1369 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 SLIT1O75093 1534 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 KDM5AP29375 1690 aaKnown RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 CHD2O14647 1828 aaKnown RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 A0A1W2PQ09 198 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 ARHGAP10A1A4S6 786 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 OR6C68A6NDL8 312 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 TACC1O75410 805 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 GALTP07902 379 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 IGFBP2P18065 325 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 MCM3P25205 808 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 TTKP33981 857 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 GJC1P36383 396 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms