RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 FAM237BA0A1B0GVD1 139 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 INSIG1O15503 277 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 USP1O94782 785 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ALDH1A2O94788 518 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 CR2P20023 1033 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 CES1P23141 567 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 PLK1P53350 603 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 POLE2P56282 527 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 RHOAP61586 193 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 IRX1P78414 480 aaPredicted RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 CDK18Q07002 472 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 MPP2Q14168 576 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 POU6F1Q14863 301 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SMAD1Q15797 465 aaKnown RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 PCID2Q5JVF3 399 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SPANXN3Q5MJ09 141 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 CYS1Q717R9 158 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 TMEM135Q86UB9 458 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 LRRC6Q86X45 466 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 PPM1NQ8N819 430 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 OSCP1Q8WVF1 389 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SLC44A1Q8WWI5 657 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 TTC17Q96AE7 1141 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ZNF669Q96BR6 464 aaPredicted RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 IFT43Q96FT9 208 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 LMLNQ96KR4 655 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 NSMCE3Q96MG7 304 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ZNF570Q96NI8 536 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 PRO3102Q9H379 93 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ECT2Q9H8V3 914 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ARNT2Q9HBZ2 717 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SCUBE2Q9NQ36 999 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 CHRAC1Q9NRG0 131 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 IL1RAPL1Q9NZN1 696 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 INTS6Q9UL03 887 aaKnown RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 SOX13Q9UN79 622 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 FCF1Q9Y324 198 aaKnown RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 A0A1W2PPM1 405 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 MT-CO1P00395 513 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 INHBAP08476 426 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SERPINH1P50454 418 aaKnown RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 ADAM15Q13444 863 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SLC1A5Q15758 541 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SLC14A2Q15849 920 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 PITRM1Q5JRX3 1037 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ATAT1Q5SQI0 421 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 YTHDF3Q7Z739 585 aaKnown RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 TRABD2AQ86V40 505 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 RNF135Q8IUD6 432 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SRRM1Q8IYB3 904 aaKnown RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 PPHLN1Q8NEY8 458 aaKnown RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 BPIFB1Q8TDL5 484 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 CCT6BQ92526 530 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 FEM1CQ96JP0 617 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ZNF778Q96MU6 729 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 NUDCD1Q96RS6 583 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 KIFC1Q9BW19 673 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 OSBPL1AQ9BXW6 950 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 LMCD1Q9NZU5 365 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SLC17A6Q9P2U8 582 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 LOC285095A0A1B0GVY8 99 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 FAM159BA6NKW6 160 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 MXRA7P84157 204 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 NSUN2Q08J23 767 aaKnown RBP eCLIP8.76□□□□□ -1.01
THBS3-210ENST00000541576 NR1H3Q13133 447 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 DHCR24Q15392 516 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ANKRD20A4Q4UJ75 823 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ASTLQ6HA08 431 aaPredicted RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 CES5AQ6NT32 575 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 TAOK1Q7L7X3 1001 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.76□□□□□ -1.01
THBS3-210ENST00000541576 MZB1Q8WU39 189 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 CDKL2Q92772 493 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 MFSD3Q96ES6 412 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 FGFR1OP2Q9NVK5 253 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 NOP53Q9NZM5 478 aaKnown RBP8.76□□□□□ -1.01
THBS3-210ENST00000541576 LHX3Q9UBR4 397 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 GGA2Q9UJY4 613 aa8.76□□□□□ -1.01
THBS3-210ENST00000541576 ZCWPW2A0A1B0GU75 182 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 CCDC78A2IDD5 438 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 K7ERQ8 282 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 EPOP01588 193 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 ATXN1LP0C7T5 689 aaKnown RBP8.75□□□□□ -1.01
THBS3-210ENST00000541576 PABPC1P11940 636 aaKnown RBP8.75□□□□□ -1.01
THBS3-210ENST00000541576 KRT15P19012 456 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 HLA-DPA1P20036 260 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 EML3Q32P44 896 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 FUT11Q495W5 492 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 SIRPB2Q5JXA9 342 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 PKN3Q6P5Z2 889 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 METTL3Q86U44 580 aaKnown RBP8.75□□□□□ -1.01
THBS3-210ENST00000541576 SLC26A11Q86WA9 606 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
THBS3-210ENST00000541576 ATP2A3Q93084 1043 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 CERS2Q96G23 380 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 CLEC1BQ9P126 229 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 CDH7Q9ULB5 785 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 TCAF1Q9Y4C2 921 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 DOCK8Q8NF50 2099 aa8.75□□□□□ -1.01
THBS3-210ENST00000541576 CXorf51AA0A1B0GTR3 108 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms