RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 JMJD8Q96S16 334 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 MEIS3Q99687 375 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 FERMT1Q9BQL6 677 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 SLC46A2Q9BY10 475 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 SERHL2Q9H4I8 314 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 MMRN2Q9H8L6 949 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 CRLF2Q9HC73 371 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ATP13A1Q9HD20 1204 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ZNHIT6Q9NWK9 470 aaKnown RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 GPRC5DQ9NZD1 345 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 JKAMPQ9P055 326 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 HMG20BQ9P0W2 317 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 FBXL17Q9UF56 701 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 GRID1Q9ULK0 1009 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ANGEL1Q9UNK9 670 aaKnown RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 MTMR6Q9Y217 621 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 RCE1Q9Y256 329 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 KCNK7Q9Y2U2 307 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 CHTOPQ9Y3Y2 248 aaKnown RBP5.66□□□□□ -1.5
DDB1-219ENST00000541513 ACTL7AQ9Y615 435 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 FAM205AQ6ZU69 1335 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 COL4A1P02462 1669 aa5.66□□□□□ -1.5
DDB1-219ENST00000541513 ARPC4-TTLL3A0A0A6YYG9 625 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 LINC00854A0A1B0GVQ3 168 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 SYCE3A1L190 88 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 HTR3EA5X5Y0 456 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 FADS2P1A8MWK0 482 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 TMCO5BA8MYB1 307 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 H0YCG3 227 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 CXCL11O14625 94 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 N4BP3O15049 544 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 ZSCAN9O15535 394 aaPredicted RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 MTRF1O75570 445 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 CHEK2O96017 543 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 MPOP05164 745 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 RHOXF2BP0C7M4 288 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 EPXP11678 715 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 ACP5P13686 325 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 PRG2P13727 222 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 ELNP15502 786 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 PDGFRAP16234 1089 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 TRIM21P19474 475 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 GDI1P31150 447 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 MDH1P40925 334 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 SKIV2L2P42285 1042 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 RAB28P51157 221 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 STAT5BP51692 787 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 PNLIPRP2P54317 469 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 SNU13P55769 128 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 TRA2BP62995 288 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 ELP6Q0PNE2 266 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 CSTF3Q12996 717 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 MTX1Q13505 466 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 GRAPQ13588 217 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 GAMTQ14353 236 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 ASTE1Q2TB18 679 aaPredicted RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 PLA1AQ53H76 456 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 KCNT1Q5JUK3 1230 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 EPHA10Q5JZY3 1008 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 MFSD14BQ5SR56 506 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 PPP1R32Q7Z5V6 425 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 ADCK2Q7Z695 626 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 USP37Q86T82 979 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 FSTL5Q8N475 847 aaPredicted RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.65□□□□□ -1.5
DDB1-219ENST00000541513 TC2NQ8N9U0 490 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 KDM1BQ8NB78 822 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 PIK3C3Q8NEB9 887 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 RASSF8Q8NHQ8 419 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 MBD3L2Q8NHZ7 208 aaPredicted RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 GRAPLQ8TC17 118 aaPredicted RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 HDAC11Q96DB2 347 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 LRIG1Q96JA1 1093 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 RHOXF2Q9BQY4 288 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 PLVAPQ9BX97 442 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 COL25A1Q9BXS0 654 aaPredicted RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 PACSIN1Q9BY11 444 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 OSGEPL1Q9H4B0 414 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 CLSTN2Q9H4D0 955 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 BICC1Q9H694 974 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 GCM1Q9NP62 436 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 PRMT8Q9NR22 394 aaPredicted RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 GLRX2Q9NS18 164 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 IARS2Q9NSE4 1012 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 TCP11L1Q9NUJ3 509 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 EXOC1Q9NV70 894 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 INTS6Q9UL03 887 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 GABRQQ9UN88 632 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 N6AMT1Q9Y5N5 214 aa5.65□□□□□ -1.5
DDB1-219ENST00000541513 DDX49Q9Y6V7 483 aaKnown RBP5.65□□□□□ -1.5
DDB1-219ENST00000541513 SNED1Q8TER0 1413 aa5.65□□□□□ -1.51
DDB1-219ENST00000541513 LOC102723996A0A087X1L8 192 aa5.64□□□□□ -1.51
DDB1-219ENST00000541513 LOC105369274A0A096LPK9 316 aa5.64□□□□□ -1.51
DDB1-219ENST00000541513 LOC102723532A0A0G2JNH3 316 aa5.64□□□□□ -1.51
DDB1-219ENST00000541513 ANXA2P2A6NMY6 339 aa5.64□□□□□ -1.51
DDB1-219ENST00000541513 ZNF839A8K0R7 811 aa5.64□□□□□ -1.51
DDB1-219ENST00000541513 KDM4EB2RXH2 506 aaPredicted RBP5.64□□□□□ -1.51
DDB1-219ENST00000541513 SLC30A4O14863 429 aa5.64□□□□□ -1.51
DDB1-219ENST00000541513 TO15178 435 aa5.64□□□□□ -1.51
DDB1-219ENST00000541513 CBFA2T3O75081 653 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms