RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 H3BQV1 296 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 CACNB4O00305 520 aaPredicted RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 TGFB1I1O43294 461 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 LRRTM2O43300 516 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 DLGAP3O95886 979 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 LCP1P13796 627 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 CD1CP29017 333 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 YWHAEP62258 255 aaKnown RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 SLC20A2Q08357 652 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 GOLGA7BQ2TAP0 167 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 PRR30Q53SZ7 412 aaPredicted RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 FAM26FQ5R3K3 315 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 SLC6A19Q695T7 634 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 CXorf57Q6NSI4 855 aaKnown RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 RETSATQ6NUM9 610 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 DPY19L3Q6ZPD9 716 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 IRF2BP1Q8IU81 584 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 NXPE1Q8N323 547 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 BMPERQ8N8U9 685 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 ST6GALNAC3Q8NDV1 305 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 OR10G6Q8NH81 332 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 TMC2Q8TDI7 906 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 TATDN2Q93075 761 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 SNRNP40Q96DI7 357 aaKnown RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 ZSCAN31Q96LW9 406 aaPredicted RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 ANP32EQ9BTT0 268 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 OSBPL1AQ9BXW6 950 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 ULBP3Q9BZM4 244 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 TSPAN16Q9UKR8 245 aa9.56□□□□□ -0.88
YBX3-211ENST00000541351 PNMA8BQ9ULN7 279 aaPredicted RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 MRPS18BQ9Y676 258 aaKnown RBP9.56□□□□□ -0.88
YBX3-211ENST00000541351 CSMD2Q7Z408 3487 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 FAM221AA4D161 298 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 ZSCAN5CA6NGD5 496 aaPredicted RBP9.55□□□□□ -0.88
YBX3-211ENST00000541351 C16orf96A6NNT2 1141 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 C21orf140B9A014 251 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 PDE2AO00408 941 aaPredicted RBP9.55□□□□□ -0.88
YBX3-211ENST00000541351 TNFRSF10CO14798 259 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 DNAJB5O75953 348 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 GARSP41250 739 aaKnown RBP9.55□□□□□ -0.88
YBX3-211ENST00000541351 NUMBP49757 651 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 CCL11P51671 97 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 ILF3Q12906 894 aaKnown RBP eCLIP9.55□□□□□ -0.88
YBX3-211ENST00000541351 ZNF805Q5CZA5 627 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 PARS2Q7L3T8 475 aaKnown RBP9.55□□□□□ -0.88
YBX3-211ENST00000541351 DCAF4L2Q8NA75 395 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 Q8NA96 180 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 CHST14Q8NCH0 376 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 DQX1Q8TE96 717 aaKnown RBP9.55□□□□□ -0.88
YBX3-211ENST00000541351 ELMO3Q96BJ8 720 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 FAM149B1Q96BN6 582 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 MYEOVQ96EZ4 313 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 ALG14Q96F25 216 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 APOOQ9BUR5 198 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 GSDMCQ9BYG8 508 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 ING2Q9H160 280 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 TNMDQ9H2S6 317 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 ASF1BQ9NVP2 202 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 KIAA1257Q9ULG3 409 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 FRMD4BQ9Y2L6 1034 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 COPG1Q9Y678 874 aaKnown RBP9.55□□□□□ -0.88
YBX3-211ENST00000541351 WASF2Q9Y6W5 498 aa9.55□□□□□ -0.88
YBX3-211ENST00000541351 POLEQ07864 2286 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 ZG16O60844 167 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 RHOBTB3O94955 611 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 RHOCP08134 193 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 RRM1P23921 792 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 DNA2P51530 1060 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 SUOXP51687 545 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 CDH4P55283 916 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 IRF4Q15306 451 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 KNOP1Q1ED39 458 aaKnown RBP9.54□□□□□ -0.88
YBX3-211ENST00000541351 KLHL40Q2TBA0 621 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 CARD16Q5EG05 197 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 BEND5Q7L4P6 421 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 EPM2AIP1Q7L775 607 aaPredicted RBP9.54□□□□□ -0.88
YBX3-211ENST00000541351 SETD3Q86TU7 594 aaPredicted RBP9.54□□□□□ -0.88
YBX3-211ENST00000541351 NELFCDQ8IXH7 590 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 GLIS1Q8NBF1 620 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 TP53I13Q8NBR0 393 aaPredicted RBP9.54□□□□□ -0.88
YBX3-211ENST00000541351 SLC4A11Q8NBS3 891 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 OR56A4Q8NGH8 313 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 ZDHHC1Q8WTX9 485 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 EPSTI1Q96J88 318 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 HSFY1Q96LI6 401 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 CTRCQ99895 268 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 GPR87Q9BY21 358 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 TRIM55Q9BYV6 548 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 TNKS2Q9H2K2 1166 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 ZDHHC6Q9H6R6 413 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 CISHQ9NSE2 258 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 LUZP4Q9P127 313 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 C5AR2Q9P296 337 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 PDP2Q9P2J9 529 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 PADI1Q9ULC6 663 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 TBC1D30Q9Y2I9 924 aa9.54□□□□□ -0.88
YBX3-211ENST00000541351 IGHV1OR21-1A0A087WYE8 117 aa9.53□□□□□ -0.88
YBX3-211ENST00000541351 SSU72P8A0A1W2PR75 194 aa9.53□□□□□ -0.88
YBX3-211ENST00000541351 TMEM200CA6NKL6 621 aa9.53□□□□□ -0.88
YBX3-211ENST00000541351 GRID2O43424 1007 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms